Siniperca chuatsi (mandarin fish): 122888213
Help
Entry
122888213 CDS
T08948
Name
(RefSeq) cilia- and flagella-associated protein 54-like
KO
K25553
cilia- and flagella-associated protein 54
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
schu03037
]
122888213
Cilium and associated proteins [BR:
schu03037
]
Motile cilia and associated proteins
Sperm associated proteins
122888213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
122888213
NCBI-ProteinID:
XP_044078247
LinkDB
All DBs
Position
LG14:complement(12969586..13003473)
Genome browser
AA seq
2572 aa
AA seq
DB search
MELPASYYGKLDKRNPVISAFERDVNLFITLMRRVASPTSQDNNGSYAKGIKILVEIWKK
YKHRLPSKLYQERMLQIADFLFGIKLYQLALWQGYSLHLLQFNSVKITDITDVDHFMTCF
FPEGFDTDQDTFSMKIRAMYGCALCIFEQEKRHTVLSQKGLCKLLHVLNFIRIMMQAFQQ
HEQLCWQIYNGSLHIYTICRYLMTMNCSAQALEYLLWASISLELSIPLMTANYLPWIVTL
YCAVCHCYYDNQAALQAEEFARRALGKINELAKMEEQNEVPTTRETQRAYKEASIKLAAM
MFKRAVFEARRRPKAMFRIKTKSTLKDITNAPWPRTTTERMLMGLFDSSAAQFLGILEAL
WDSTRRPLQTRMPDEPELQEVILELLSAGISILSGVATTSEPLSALTPTSTLIDLAITGE
NKVPIMSAMRFIKLLFQYKQQDAFTEFARAMLQVLSGVEGQSFRRAELELALLDSFNSLL
SSQRTRPRENMTDERHKSSFSISDEFIGLVDTLHKSVCGSTPEAQPDGDLVLDVVLFLWG
KVKVVMQRDQLQNLEFTHYLEKVDNYDKWLWCLSMLCDVAFACDLATVDCIMTAEMIHTL
AILLESAAERSNQTQCLAAAEADSDGVKSSSFSLLGSSSIELLQKVCEVVERGLKALAKG
VATLLPQDCSAITDSAFMQKFSPLPPSTHSLSSPTSSEGGNEEDELSKKEKEEMETKASD
IKGSPHTQSTRVSLLATDLHLELDIIHHRASLKLLQLNAVAESELLDRIKKNKVSKALFM
IQKALLLYNNMEPNNSNKTKSLLEEAYTLIERAGVEERKLYISTTPKTPSENEDKGIKEE
EENPPPPPILLSRTDHSLTFVPAPYNLEGQVCWYQLCGRTAEGINQKVRLGDCSLPGTGN
MVPAVSGECVLRVDGLEPNQKYVFAVAAYSSQGKLLGNTIGVTTFPLLATMPVPLLSTWV
HLAQVAFQTEQYTVAKRACRELWSHYTYPDPGSHSTQDRLATTGLRVQTLKHSSRHLCQL
FLTSIFIETEINIQQGSLYCDSFSDSGPFIWEQEARLAECERMLVAMDLALWLNDDSAAV
QAVVCCYGLLAPLIFHQITCNPVVQVLKKCLIVLEENSGLLKQKWTGNTSESFMHMIACI
TYYLSKALRVLREHQMASVVMDCGRRLLQEVYDVQLQISRFANEASKTDHAAIKGEMKTS
LQLKALHLNNKKITTSEAALTADNEISRPLTGCDDPTILYDLISNSTLKDAYQDVMKLRR
KAHFIEFAALLLQRTMEEGQPDLVLKWGQSIFEFLSRRDEVMGLSTKCLEGNGQSKRRSS
AQAPKGNEPPQNKNTPSLDDTRKKLKQKMPHSMLQRVRTNRDMQAVENLLTMMSSVVQRH
KKQLQLRNMCCEERVWKAHLNYSLAQAHLALLHQDLDQLYGRALQHRYSQLNPLCFSLAY
SGVLVRRNSQRQQSSKYEAVSERDSSHSGLRDYVAVHKDRSKKEAVRVDDSVTEESCEEG
EDSSQTVEQQIKMHRRTAALLLDSLNKAALHLRRAMVLAHRGSHWTTLQCVCQTVWDQSC
LITVLVQRAAQLDPPSPITADQLHTIFTPILVLATDLIMDMLNRLGLWSLYDSDLTEEEL
ESSLHFSAPLDDSTQVDLRLVRTLVLHTLERLHDSGKWESLAHFALVFNSYTRERYALIL
SPLLVHAQRRLLERISSFGGPAVPQPHHVKTQKATGKEVTYRSYGGSQLLSGWTPHPAQQ
PLSRKKAALTNSTPRDAVDLKGAEIQHSMFLVCVPLDVEDTLSCYRQALERRPHCLQVFQ
HSRSLLLLLLAYTQPCFAAQLQHCQSRSLSHCASLVDFSPIVMRSPNIQSCDLTEEDYST
PNALYSLPVSPDHMPTVTAAYSTSIKYLQANGHDSLKVLALHEMGNLQFYNGNTRAAHSY
WSKAVDCALQSSGTVEKWDGVSFGGGTLQQTLKKAGIWGCLQAAGLTAKIAQYILTSDIT
QRTKCCLLSAHLFKCVLCCSLAQPQADFQYAYHSISDELLPGVDLFSEPHRAHLGTTVTS
LNFICHWLFTTGYYITLLPILALYLYFVGTVCRDLQRTVEGKILKVRALTELCLFTEAVK
ESVQLTQGTGVLRPYGHLIAKDNLQPVKTFYSNKSLLDNAEALEGLVNCDFAPEVRTLYG
STLCLRFNLARIQLVLALSNTVNGPPVPDSVEGGACITSCSVNSKHHEQDRLDTEGSCLK
TEEPKVLTLDTEKENLTPEKIKFLLLEGASSLLHSHQLMSQSCSEMENLELAIESHLLKA
NLYLQQGHAALSSEIAVSSLVLLQTSPVIMRGSIPVSQKPASELPHAKTESEQHGDCPRT
VEASERIGVSLWLRCRLALVRSLAAHIPGTAALFPGKNINEETARVIQEGLDECALWGDV
DIQALLMVEGAELEAQRGKTDDSMAMLQKAVVLLSGRTCMPPGSTVTLARATLLLSDLRG
IRSTTLLKLTQKLLKKQLCVFGQSVVLDDGFFPPGPSNIYLPYLSLLDQTTLRMGHILDL
STMEMPVSAQSSQSTSRQHSHQSSHIKRDSQAPILSLSNPSTSSPTPPRPAR
NT seq
7719 nt
NT seq
+upstream
nt +downstream
nt
atggaattaccggcttcatattatgggaaacttgataaaagaaacccagttatttccgcc
tttgaacgagacgttaacttgtttataacactgatgagacgagtcgcttctccgaccagc
caagacaacaacggctcttatgccaaagggattaaaatcctggtggagatatggaaaaag
tacaaacatcgactgccttcgaagttgtaccaggagcgcatgttgcagattgcagatttt
ctctttgggataaagttgtaccaactggctctttggcagggctacagtctccacctcctg
cagttcaactcagtgaaaataactgacatcacagatgtggaccacttcatgacctgcttc
ttccctgaaggttttgatacagaccaagatacgttttccatgaagatccgtgcaatgtat
ggttgtgccctgtgtatatttgagcaggagaaaaggcacactgtcctcagccagaaggga
ctctgtaaactgctgcatgtgttgaacttcatcaggatcatgatgcaggcttttcagcaa
catgagcaactctgctggcaaatatataatggttcgttacacatctacaccatctgccgt
tacctgatgaccatgaattgtagtgcacaggcactggagtatcttctgtgggcaagcatc
agtttagagctctccatccctctgatgactgctaactatctgccatggattgtcacactc
tactgtgctgtctgccactgttactatgacaaccaggctgcgttgcaggcggaggaattt
gccaggagagcccttggaaaaattaatgagctggcaaagatggaggagcaaaatgaagtt
cctaccaccagagagactcagagagcttacaaagaagcttctataaagctggctgccatg
atgttcaaacgggcggtgtttgaggccagaaggagacccaaagccatgttcagaatcaaa
accaaaagcaccctgaaggacataaccaatgcgccatggcctcgtactacaacagagcgc
atgctaatgggcctgtttgacagcagcgcagcacagttcttgggtatcttggaagcactt
tgggacagcaccagacgcccactgcagacgaggatgccagatgaaccagagctgcaggag
gtgatcctggaactcctgtctgctggcatcagtatattatctggagtcgcaactactagt
gagcctcttagtgcactgacaccaacatccactctaatagatttggccattacaggagaa
aacaaagtacccatcatgtctgcaatgaggttcattaagctgttgtttcagtacaagcag
caagatgcattcactgaatttgccagagcgatgctgcaggttttgtctggtgtggaaggt
cagtcattcaggagggctgagctggagcttgctttacttgacagtttcaacagtctgctg
tcttcccagaggacccgtcctagagagaacatgactgatgaaagacacaagtcttcattc
tcaataagtgatgagttcattggcctggtagacaccctgcacaagtctgtttgtggctct
actcctgaggcgcagccagatggggacctggttttggatgttgtgttatttctgtggggt
aaagtgaaggtggtgatgcagagggatcagctgcaaaacctagagtttacacactacctt
gagaaggtagataattatgacaagtggctgtggtgtctgtctatgctgtgtgacgtggcc
tttgcctgtgacctggcaaccgttgactgcataatgacggcagagatgatccacacattg
gccatactgctagagagtgcagctgaacgcagtaatcaaacacaatgtctagcagctgct
gaagcagacagtgatggtgtgaagtcaagctctttctctcttcttgggagttcaagtata
gagctgcttcagaaggtgtgtgaggtagtggagaggggtcttaaagctctggcgaagggt
gtagccacactgctgccccaagattgctcagcaatcactgactctgccttcatgcagaaa
tttagtcccctccctccatcgactcattccctatcttctccgacatcatcagaaggggga
aatgaagaagatgaattaagtaagaaagaaaaagaagaaatggaaactaaggcatcagat
attaaaggctctccgcacactcagtccacacgtgtgtctctgctggccaccgaccttcat
ctcgagctagacatcatccaccacagggcttccctcaagttactgcagctaaatgcagtc
gcagagtctgaactgttggatcggatcaaaaagaacaaggtgtccaaagctcttttcatg
atccagaaagccttgctgctgtacaacaacatggagccaaataacagcaacaaaaccaag
agtctgctagaggaggcctacaccctgatagagagagcaggtgtggaagagagaaaactg
tatatctccaccacccctaagaccccttctgaaaatgaagacaaagggattaaggaggaa
gaagaaaatcctccacctcccccgatcctactctcacgcactgaccactccttaaccttt
gtcccagcaccttataacttggaaggacaagtgtgctggtaccagctctgtggccgtaca
gctgagggcattaaccagaaagtccgccttggagactgcagcctgccaggaactggaaat
atggtaccagcagtatctggtgagtgtgtgctgagggtggatgggctggagcccaaccag
aagtatgtgtttgctgttgcagcctacagtagccagggaaagctactgggcaacacaata
ggggtgacaacatttccactgctggcaaccatgccagtaccactgctctccacgtgggtt
cacttagcacaggtggcatttcaaacagaacagtataccgtagcaaagagagcctgcagg
gaactgtggagccactatacgtaccccgaccctgggtcacacagcacacaggatagactc
gctaccacagggctccgtgtccagaccctgaaacactcatctcgtcacctgtgtcagttg
tttctcacttccatcttcattgagacagagatcaacattcagcagggatcgctctactgt
gactcattcagtgacagtggaccgtttatctgggaacaggaagccagactggcagagtgt
gagcgaatgctggtagccatggacctggcgttgtggttgaatgatgatagtgctgccgtg
caagctgtagtatgctgttatggcctcttggcacctctaatcttccatcagatcacttgc
aaccctgtggtacaggtgctaaaaaaatgcttgatagttttggaggagaattcaggtctt
ctcaaacaaaaatggacaggaaacacctcagagtcatttatgcacatgatagcctgcatc
acctactacttgtcaaaggcattacgtgtgctaagggagcatcagatggcgtctgtggtg
atggactgtggtcgcaggctgctccaagaggtctatgatgtccagctgcagatcagtaga
tttgccaatgaagcttctaagacagatcatgctgcaatcaagggtgaaatgaagacaagt
cttcagctgaaggcactgcacttgaataacaagaaaataaccacatctgaagcagctctc
acagcagacaatgagatttcacgcccactaaccgggtgtgatgatcccactatattgtat
gatctgatctccaacagcacattaaaggatgcctatcaagatgtgatgaagctcagacgc
aaggcacattttatagagtttgcagcactacttctccagagaaccatggaagaaggccaa
ccagaccttgtgttaaagtgggggcaaagcatatttgaatttctttccaggcgtgatgag
gtgatgggactgtccacaaaatgtttggagggaaacggtcagagtaaaagaagaagtagt
gctcaggctccgaaaggaaatgaaccaccccagaacaagaacacaccttctcttgatgat
acaagaaagaagctaaagcagaaaatgccacacagcatgcttcagagagtgagaactaac
agggatatgcaggctgtggagaacctgttaaccatgatgtcatctgtagtgcaacgccac
aagaagcagcttcagctgaggaacatgtgctgtgaggagagagtgtggaaggctcacctc
aactatagcttggctcaagcccatttagcattgcttcatcaggacctggaccagctgtat
ggaagagccctgcagcacaggtacagccagttaaatcccctgtgtttctctctggcctac
tctggtgtcctagtgcgaaggaactcacagcgacagcagtcttctaaatacgaggctgtc
tcagagagagactcctctcactccggtcttagggattatgtggctgtacacaaagacagg
agcaaaaaggaggcagtcagagttgatgactctgttacagaggagagttgtgaggaggga
gaggactcctctcaaactgtggaacagcagattaagatgcacagacggactgctgccttg
ctgctggactcacttaacaaagctgctttacatctccgaagggccatggtgttggcccat
cgtggcagccactggaccactctgcagtgtgtttgtcagactgtgtgggaccaaagctgc
ttaatcaccgtcctagtacagagagctgctcagcttgaccctccttctcccatcacagca
gaccagctgcataccatcttcaccccaatactggtgctggctactgacctaataatggac
atgctgaacagactagggctgtggagtttgtatgacagcgacttgactgaggaggaacta
gagtccagtctccacttctcagccccactagatgacagcacccaggtggacctgcgtttg
gtccgcaccttggtgctgcacactctggagcgtctccatgacagtggcaaatgggaaagc
ctggcccactttgccttggttttcaactcatacacgcgggaacgttatgccttgatccta
agtcctctactagtccatgctcagaggaggctgcttgaaaggattagttcttttggagga
cctgcagtcccacaaccacaccatgtcaagacacagaaggccactggcaaggaggtaact
tacaggagctacggaggctcccagctgctcagtgggtggacccctcaccctgcacagcaa
ccgctcagtcgtaaaaaagcagcactcacaaactccactcctcgagacgcagttgatctt
aaaggtgcagagatacagcactccatgttccttgtgtgcgttcctctggatgtagaagac
acactgagctgttaccgtcaagctcttgagcgaagaccacattgtcttcaggtcttccag
catagtcgctcattgctgcttctgctcctggcatacacacaaccctgctttgcagcacag
ttgcaacactgtcagagcagaagtctcagccattgtgcaagcctggttgatttcagtccc
atagttatgcgcagtccaaacatccaatcttgtgacctgacagaggaggactacagtact
ccaaatgctctctacagcctccctgtcagccctgatcacatgccgactgtcactgctgca
tactccacctccattaagtatctccaggccaacggtcatgactccctcaaagttctggca
ctgcatgaaatgggaaacctacagttctacaatggaaacacacgggcagcacactcgtac
tggagtaaagcggtagattgtgccttacagagctcaggcactgtagagaaatgggatggc
gtgtcctttgggggtggcaccctgcaacaaaccctgaaaaaggctggcatttggggatgt
ctgcaggctgcagggcttactgctaagattgcacagtatattttaacttctgatatcacc
cagaggaccaagtgctgtctcctgtctgctcacctgtttaagtgtgtgctgtgttgctcc
ctggctcagccccaggccgacttccagtacgcctatcacagcatcagcgacgaactgctc
cctggagtcgaccttttctctgaaccccacagggctcacctcggcaccactgtaaccagc
cttaacttcatctgccactggcttttcaccacaggctactacattacgctactgcccata
ctagccctttacctatattttgtggggactgtgtgcagagatttgcaacgcactgttgag
ggcaaaatacttaaggtacgtgcccttacggaactgtgtctattcactgaagctgtaaaa
gaatccgttcagctcacacaaggaacaggagtccttcgcccttatggacacttgatcgcc
aaagacaatctccaacctgtgaagacattctacagcaacaagtctctcctggacaatgct
gaggctttggaaggacttgtgaactgtgactttgctccagaggtccgcacgctgtatgga
tccacattgtgcctccgattcaaccttgctcgtattcaactagtcctggcactcagtaac
accgtaaatggccctcctgtgccagattctgttgaaggaggagcttgcataacaagttgt
tcagtgaactcaaaacaccatgaacaggacagactggacactgagggctcttgtctaaag
acagaagagccaaaagtgctgactcttgatactgagaaagagaatctcactccagaaaag
attaagtttcttttgctagaaggagcgtcctccttgttgcactcgcatcagctcatgtct
cagtcctgtagcgaaatggagaacctggaactggcaatagagtcccatcttctaaaggcc
aacttatacctgcagcaaggacatgctgcacttagctctgagattgcagtttcatccttg
gtgctgctgcagacatctcctgtaatcatgagaggatccatacctgtctctcagaaacct
gcgtctgagctcccacacgccaagactgaaagtgaacagcatggagactgtcccagaaca
gttgaggccagtgagagaattggagtttctctgtggctgcgttgccgcctggctctggtc
cgtagcctggctgcacacatccctggcactgctgcccttttcccaggtaagaacattaat
gaggagacagctcgggtgatacaggagggtcttgatgaatgtgctctatggggagacgtc
gatattcaagcccttttgatggtcgaaggtgcagaattggaagcacagagaggcaagact
gatgacagcatggcaatgctgcagaaggctgtggtcttactgtcgggacggacatgcatg
ccaccagggtctactgtgacactggctcgggccactttgctgctcagcgacctgagagga
atacggagcaccacacttctaaaattgacacagaaactactgaaaaaacagctgtgtgtc
tttggtcagagtgtggtgttggatgatggattctttcctcctggacccagcaacatctac
ctcccttacctcagtttactggatcagaccactttgcgaatgggtcacatcctggatcta
agcaccatggaaatgccagtctctgcccagtcatcacaatccacttccaggcagcattca
caccagtcaagccatattaagagagactctcaagcaccaattctgtctctgagcaaccca
agcacctccagtcctacccccccacgcccagccagatag
DBGET
integrated database retrieval system
