Siniperca chuatsi (mandarin fish): 122888240
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Entry
122888240 CDS
T08948
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122888240 (supt6h)
03036 Chromosome and associated proteins [BR:
schu03036
]
122888240 (supt6h)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122888240 (supt6h)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122888240 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
122888240
NCBI-ProteinID:
XP_044078347
LinkDB
All DBs
Position
LG14:complement(16115922..16134150)
Genome browser
AA seq
1748 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEEDDEEEEENTEDQDERGNLRGLIDDGDEE
EGDDEEEAQRSPSGGGSESEEEVRHRRKKRNFHDYLDEDDLALIEENLGVKVKRRKKKYD
RVKTLDDDEDDDDEKDLIADEIFHGDAEGELEDGEAVDEPLQHADDDEEGEDEESDIDDF
IVDDDGQPITKKRGKKIPGYTDAALQEAQDIFGGDFDFADFDADAYDQGEEEEEDQDEEG
WDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRTTDMPERFQLRSIPVKPAEDD
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPTTITKIKEALNFMRNQQFE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISADP
DKPLADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKASKKRLKKI
KEVSEDGEEEELEVEQQEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGEN
LRDSYQRHETEQFPAEPVELAKDYVCSQFATPEAVLEGTRYMVAMQIAREPLVRHVLRQT
FQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGEQFLKMCLAEDEGLLSIDI
CIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKEL
KSKLIAEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPS
RDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKAHDIENLKKFLSGKKPHVVA
VAGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEVDFRDYPPL
LRQAVSIARKIQDPLMEYAQVCSSDDDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEV
GVDVNKAIAHSHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFI
NCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGAL
EEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNTEEV
FNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPEL
SEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMK
IDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQHRTPYIKRV
IAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKE
NAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNWGSKEKMEELLVK
TKREKPTFIPYFISACKDLPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFR
WFKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIAA
VTGQGQNPNTTPAQWGSSQYGYGGSSGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTP
SQQALGTPQYPGSTPQSSHSHAHPHGGHPSHHSHHGHHSSHHGHSSSTPSSSTSSRGRTP
QQQPKASGSSASAVDWGKMAEQWLKEKEAEGRKKTQRMTPRPSPSPMIESTPMSIAGDAT
PLLDEMDR
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttcattgagagcgaggctgaggagtcagaggaggagtttgaagagaaagac
cttaaacctaaaaagacccagaggtttatggaagaagatgatgaagaggaagaagagaac
acagaggaccaggatgagcgaggaaatttacgcggcctcattgatgatggagacgaggag
gagggggacgatgaagaagaagctcaaaggagtccaagtggaggggggagtgagtcagag
gaggaagtgaggcatcgacgtaaaaagcgcaattttcacgactacctggatgaggatgat
cttgccctaattgaggaaaacttaggtgttaaagtaaaaaggaggaagaagaaatatgac
cgtgtaaaaacacttgacgacgatgaagatgatgatgacgagaaggatttgatcgcagat
gagatttttcatggtgatgcagagggcgagctcgaggatggcgaggctgtcgatgagcct
ctccaacacgcagatgatgacgaagaaggagaggacgaggagtcagatatagacgatttt
attgtggatgatgatggccaacccatcaccaaaaagaggggcaagaagatcccaggatac
acagatgcagccctccaggaggcccaagacatttttggtggcgactttgactttgctgac
tttgacgcagatgcttacgatcagggtgaggaggaggaagaggaccaggatgaagagggt
tgggaccgacccaagaaacagactaagaggaggcaagggaggaagagcatctttgagatc
tacgagcccagtgagctggaaagtagtcacatgactgaccaagacaatgagatccgcact
actgacatgcccgagaggttccagttacgatccatccctgttaaacctgctgaggacgat
gagctggaagaggaagcagaatggatcttcagacatggcttctccactctgactatctct
atgcaggagagcacagattatctagacaggggaacaaccacaaacttcagcaggaaaggc
cccaccacaattaccaaaatcaaagaggccctcaactttatgaggaatcaacagtttgag
gttccattcatagctttctacaggaaagaatatgtggagccagaactaaacatcaatgac
ttgtggaaggtgtggcagtgggatgaaaagtggactcaactgaagacccggaagcagaac
ctgacccgtctgtttcagaagatgcagtcctaccaatttgagcaaatctcagctgaccct
gacaaacctttggctgacggcatccgtcctctggacacagctgacatggagaggctgaaa
gatgtgcagactcttgaagagctgggtgatgtgtacaaccactttctgctctactatggc
cgagacatccccaagatgcagaatgctgccaaggccagcaagaagaggctcaagaagatc
aaagaagtgtcagaggacggtgaagaagaggaattggaggtagaacaacaagaagaagaa
cagaaaggtcctgacctcaagctggcatctcgtagagatatgtacagcatctgtcagagc
gtaggacttgatggcttggctaaaaagtttgggttaactccagagcagtttggagaaaat
ctgagagacagttaccagcgtcacgagacagagcagttcccggctgagcctgtagagctg
gccaaagattatgtttgcagtcagttcgccactcctgaggcagtgctggaaggaaccagg
tacatggtggccatgcagattgctcgcgaacctctggtcagacatgttctccgacagacc
tttcaggagcgggccaagatcaacatcaagccaacgaagaagggcaaaaaggaggtagat
gaggctcattttgcctactccttcaagtatcttaagaacaagcctgtaaaagagctgaat
ggggagcagttcttgaagatgtgcctggcagaggacgaggggctgctttccattgacatc
tgcatagaccttataggggtgaaaggatatgctggggaccagacgtactttgatgagatc
aaacagttctactacagggatgagttcagtcaccaggtgcaggagtggaacaggcagcga
actttagccatagagagagcactcaatcagttcctctaccctcagatggccaaggagctc
aagagcaaactgatcgctgaggccaaagagagcattgtcaggtcctgctgtcgtcggttg
tataactggcttaaagtggctccttataggccagatcagcaggttgaggaagacgatgat
ctaatggatgagagtcaaggcaaaggcattcgggtgctgggtgtagcctatgcacccagc
agagatacaccagttttctgcgctctgatcaacggggaaggagaggtggtagacttcttg
cgtctaccctacttcatgaagaggaggaatgcctttagggaggatgagagagagaagaag
gcacacgacattgaaaatctcaagaagtttctgtccggcaaaaaacctcatgtggtagct
gtcgctggggaaaaccgggatgcccaaatgatcatggaggacatcaagaggactatcagc
gagcttgagcaagagtcctctctgcctgctgtgggagttgaacttgttgacaatgaattg
gccacactgtacatgaacagcaagaaatctgaggttgattttagggattaccctcccttg
ctgcgacaggctgtgtcaatagccaggaaaatccaggatcccctgatggagtatgctcag
gtttgcagctcagatgatgatattctctgcctcaaactacacccactacaggaacatgtg
gtgaaggaagatttgctctgtgctctttactgtgaattcatcaaccgtgtcaatgaggtt
ggagtggatgtgaacaaagccatcgcccattctcacactcagagcctggtccagtatgtc
tgtggtctgggaccaaggaagggctcccacctgctcaagattctgaagcagaacaacact
cgtctggaaaacagaacccagctggtcacaatgtgtcacatgggacccaaggtctttatt
aactgtgccggtttcatcaagattgacaccgcatcgcttggggacagcacggactcctac
attgaggttctggatgggtctcgtgtccaccctgagacatacgagtgggctcgcaagatg
gctgtggatgccctcgagtatgatgagtcggcagaagatgccaacccagctggagctctg
gaggagatcttggaaaatccagaacgtctcaaagacctggacctggatgcctttgctgaa
gagcttgagagacagggttacggcaacaaggggattactctgtatgatattcgtgcagag
ctgagctgcagatacaaagacctgagagttgcctacagagtccccaacactgaggaggtc
ttcaacctgctcaccaaggagactccagagacattttatattggtaagctgatcaccagt
atagtaactggtattgctcaccggcggcctcaaggagagagctatgaccaggccatccgt
aatgatgctacagggctgtggcagtgtcccttctgccagcaggacaatttccctgaactc
agcgaggtgtggaatcactttgacagcggttcatgtccaggtcaggccattggggtgcgg
tccagattggataacggcgtccagggattcattcccaccaagtttctcagtgacaaagtg
gtcaaacaccctgaggagagggtcaaggtgggcatgacagttcactgccgcatcatgaaa
attgacattgagaaattcagtgtcgacctcacatgccgcacctcagatttgatggacaag
gccaatgagtggaagctccccaaggacagctactatgactttgacacagagtccgaagac
caaaaacaggaggaggagctcaaaaagaaacaacatcgaacaccatatataaagcgtgtg
atcgcccaccccaacttccacaatatcagtttcaaccaggcagagaagatgatggagacc
ctggaccagggagacttgatcatcagacccagcagcaaaggagagaaccacctcaccgtc
acctggaaagtggctgacggtatctaccagcatgtggatgtgagagaagaaggcaaagag
aacgcattcagcttagggcacactctttggatcaataatgaagagtttgaagatctggat
gaaatcactgctcggtacattcagccaatggcgtcctttgcccgggatctactgggtcat
aagtacttccaggagtgcaactggggaagcaaggagaaaatggaggaattattggtcaag
acaaagagggagaaacccacttttattccgtactttatttcggcatgtaaagatcttcca
ggaaaattcatactgggctaccagcctcgcggaaaaccacggattgagtatgtaaccatc
accccggatggcttccgctaccgttcacagatatttcctacagtgaacggactattccgt
tggtttaaggaccattaccaagagcctgtgccaggcatcacccccagcaacagcagccga
acaaggacgcctgcatccctgaacgccaccccagccaatatcaacatcgcagacttgacg
cgagctgtcaatgccctcccacgcaacatgacctctcagatgttcagtgccatcgccgca
gtcacaggccagggccagaaccccaacaccacccccgcacagtggggctccagccagtac
ggctacggtggcagctcgggaggaggaggagggagctcctctgcttatcatgtatttgcc
acacctcagcagcccatggcgacgccaatgatgacgcccagctactcctacaccacacca
agccagcaggccctgggcacgccacagtaccctggctccaccccgcagtcctcacactct
cacgcacacccacacggaggccacccgtcacaccacagccatcacggccatcacagcagt
caccacggccactcatccagcacgccgtcatcctccacctcatccaggggacggacgcca
cagcagcagccaaaggccagcggcagcagcgcctcagcagtggactggggcaagatggcg
gagcagtggctgaaagagaaagaagcagaggggcggaagaaaacacagaggatgacgcca
cgaccgtcgcccagccccatgatcgagagcacacccatgtcgatcgccggagacgccaca
cccctgctggacgaaatggaccgatag
DBGET
integrated database retrieval system
