Siniperca chuatsi (mandarin fish): 122888269
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Entry
122888269 CDS
T08948
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18440
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122888269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122888269
Membrane trafficking [BR:
schu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
122888269
Endosome - Golgi transport
Arf GTPase associated proteins
122888269
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
122888269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
ArfGap
PH
PH_6
DUF7573
Zf_1st_IFT121
PH_2
Motif
Other DBs
NCBI-GeneID:
122888269
NCBI-ProteinID:
XP_044078447
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All DBs
Position
LG14:complement(29296446..29323394)
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AA seq
1164 aa
AA seq
DB search
MTPPLPLPVPKPRARYTRDSLSSASSLDRDLIGEDVQPLFSNGVHLSTDENAPPLPPLGG
SDRGVVFPTLAGVTDIIATKIPSLAGFATSIGGSTPTTPAPPAPSDPPSIDSMTNSIAAH
IPSLAGTGSVVANPAATTLNSASTTTPPPAANTGAASLDSIFSSLANIPSLAGIVSSVPY
PAVSSMTTTDTPSAPPPFAHKPCPPSLPRIGDANTDVGALSQLVMSTLDQNGGVTLPPLE
GAAQPTEDVIKQSPHTIREENPYITVLACWTSQEEADTDSSNEEEDTGVSPAPSGADGTT
EGDSASNPSLNTNNLLSNPSGRLIPTRPAPPPPRPSGQSEKPLKQKTPRAATIRVSRKKG
VSGSSTQQSAVVQSSWLDVWKGFRHNVLWATFDGQLMSLWKKRTDRFSELLFHVSSITNV
KKQDKGRFSVYFRKKHYDFMAHSDDVREGWVTSLLASRGQPSPTPPELHGQIAIKDPRSR
AYAAVWGHDLWIYPNKEGFQLGIASFSVPLNVATVKSTGKHSFTLITPYKNFNLSVDSSK
DLSIWLDILSSSIRSALSCSQVALRLWENPDNKVCGDCGSANPEWASVNLLLVICQACAG
QHRGLGSNLSKVRSLKMDNKVWTEPVIQLFVTYGNRLANQVWAPAVPAAEQLRPESSDEE
RSKFIQDKYSRGRYRRVHALTSSHSLMDQRLRQVVCGDDVEETMSLICSGAKVCQSDPQS
PSPILLAERAGKALQTELLRLNEYTAIPPYLPQSANRRANSAPSGEEEEELHGKLEEDRF
LFSLENDSAACDVLDLREVLSVFLKDGPAHEFEMVTLSDQLICAADNKEGLLTHLVHILK
VILPGGVSYAEVGGASAVSKVFVIEVGGASSYSDAWLLLWEDGVSVHPIQRHTEQTLRME
LGALSRHEMDPSENIITMVTADRSVSLRFEEQHSCQSWFNHLQRALTNQRAAPQRPPAAS
HSSARQSLYPVMDVGSTGSVPPAIERCISHITTYGLKVEGVYRRCGLAVKVTRLVEALMT
SPSSAPLESDEQGVLDAGSALKQYVRQQESLIPDRVRQQWLQAAVISDERSRFSAYRRLL
RQLPDDNRATLNALFGHFYMVQVLSQVNRMSAQNLALVLVPTLFQTLNQDLLRLTREFII
HHTLLFLTPEVKERAEEEEQITVF
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgactccgcctcttccacttcctgtcccgaagcctcgagctcgttacacgagggacagt
ctaagctccgcctcctctttggacagagatctgattggtgaagatgtgcaaccacttttc
tcaaatggagttcacctgagcacagatgaaaatgctcctcctcttcctcctcttggtgga
tcagaccgtggcgtcgtcttcccaactctggctggcgtcactgacatcatcgccaccaaa
atcccgtcattggctggatttgccacctccattggtggctccacccccaccacacccgcc
cccccggccccctcggaccccccttccatagacagcatgactaacagcatcgccgcccac
atacctagcttagcaggaactggtagcgttgtggctaacccagctgctactacattaaac
tccgcctccaccaccacacctccacctgctgctaacacaggtgctgctagcttagacagc
atttttagctcattagctaacatacccagtttagcaggcattgttagcagtgtgccttac
ccagctgttagctccatgacgaccacggacaccccttcagccccacccccatttgctcat
aaaccctgccccccctcactgccaaggatcggagatgctaacacagatgttggggcgttg
tcacagctggtgatgtcaactttagaccagaatggaggagtcacattacctccactagag
ggagctgctcagccaacagaggacgttataaaacagagtcctcacaccatcagagaagag
aacccttacatcactgtgttggcctgttggacgagccaagaggaagctgacactgactca
tccaatgaggaggaagatacaggagttagccccgccccctctggtgccgatggaacaacg
gaaggagattccgcttctaacccgtctttaaacaccaacaacctcctgtcaaatccatca
ggtcgtctgatccccactcgaccggccccaccccctcctcgtccttctggccaatcagaa
aagcctctgaaacagaagaccccaagagcggccactattcgagtgtccaggaagaagggg
gtcagtgggagttcaactcagcagagtgccgtggtccaatccagctggctggatgtctgg
aagggcttcagacacaatgttttatgggcaacgtttgacggacagctcatgtctctgtgg
aaaaagcggacggatcggttcagtgagttgctgtttcatgtctccagtatcaccaacgtg
aagaaacaggacaaaggcagattctctgtttacttcaggaagaaacattatgacttcatg
gctcacagtgatgatgttcgtgaaggttgggtcacatctctgctggcatctcgaggccag
ccaagccccacccccccagaactccacggacaaatcgccatcaaggacccgcggagccgt
gcctatgccgcggtttggggtcatgacctctggatttaccccaacaaggagggcttccag
ctgggcatcgcctccttctctgtccccctgaacgtggccacagtcaaatctacaggaaaa
cactcgtttaccctcatcactccatacaagaacttcaacctgtctgttgattcttcgaag
gatctgtccatctggttggacattctgtcctcatctattcgcagtgctctgtcctgcagc
caggtggcactgcgtctctgggaaaaccccgacaacaaagtgtgcggtgactgcggctcg
gccaatcctgagtgggcgtcggtcaacctgctgctggtcatctgtcaggcctgtgcaggt
cagcatcgaggtctggggagcaacctgtcgaaggtccgcagtctgaagatggacaacaag
gtctggactgaaccagtcatacagctgtttgttacctacggtaaccggttggccaatcag
gtgtgggctccagcggtgccggcggcagagcagctgcgtccagagtcatctgatgaggag
aggtcaaagttcatccaggataaatacagcagggggcgctacagacgagtccacgctctg
acctcctcacactctctgatggatcagaggctgcgtcaggtggtttgtggagacgacgta
gaagaaacaatgtctctgatctgttcaggagcaaaggtgtgtcagtcggaccctcagagc
ccctcccccatcctgctagctgagagggctggtaaggctctgcagactgagctgctccgc
ctcaacgagtacacagcgatcccgccttacctgccgcagtcagccaataggagagctaac
tctgccccctcaggtgaggaagaggaggagcttcatggtaaactggaagaagatcgtttt
ctcttctcgttagaaaacgactcggcagcatgtgacgtcctcgacctgcgagaagttctg
tctgtcttcctcaaagacggaccagctcatgagtttgagatggtgacgctgagcgatcag
ctgatctgtgctgctgacaacaaggaggggctgctgactcacctggtccacatactgaag
gtgattctcccagggggcgtatcctatgcagaggtgggcggtgcttccgctgtcagtaaa
gtgtttgtcattgaagtgggcggagcctctagttattctgatgcctggttgttactgtgg
gaggacggagtcagtgttcatcccatccagagacacacagagcagactctgaggatggaa
ctgggcgcgctcagtcgccacgaaatggatccatctgaaaacatcatcaccatggtgact
gcagacagaagtgtgtcgttgcgtttcgaggagcagcacagttgtcagtcctggttcaac
cacctgcagagagctctgaccaatcagagagcagctccacagcgtccccctgcagccagc
cacagctcagctcgtcagtctctgtacccggtgatggatgtggggtcgacgggttcagtt
ccaccggccatcgaacgctgcatctcccacatcacaacctatggtctgaaggtggagggc
gtgtaccggcgctgtggtctcgctgtcaaagtcacccgattggtggaggctctgatgaca
tcacctagctccgcccctctggagagtgacgagcagggtgtgttggatgctggctccgcc
ctcaaacaatatgtccgccagcaggagagtttgatccctgacagagtccgacagcagtgg
ctgcaagctgcagtgatttcagatgaacgctccaggttttcagcctaccgacggttgcta
cggcaacttcctgacgataaccgagcaacattgaatgcgctgtttggacacttctacatg
gtccaggtgctctctcaggtgaacaggatgtcggctcagaatctggctctggttctggtc
ccaactctatttcagactctgaaccaggatctgctcagactcaccagagagttcatcatt
caccacacacttctgtttttgacacctgaggtaaaggagagagcggaggaggaagaacag
atcactgtcttctga
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integrated database retrieval system
