Siniperca chuatsi (mandarin fish): 122888400
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Entry
122888400 CDS
T08948
Symbol
rars1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122888400 (rars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
schu01007
]
122888400 (rars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122888400 (rars1)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122888400 (rars1)
Enzymes [BR:
schu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
122888400 (rars1)
Amino acid related enzymes [BR:
schu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122888400 (rars1)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122888400 (rars1)
Prokaryotic type
Other AARSs
122888400 (rars1)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122888400 (rars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
CALCOCO1
CCDC90-like
YabA
Myo5a
Macoilin
tRNA-synt_1e
HPD
LisH_TPL
Cnn_1N
Nup54
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
122888400
NCBI-ProteinID:
XP_044078751
LinkDB
All DBs
Position
LG14:complement(27264848..27293147)
Genome browser
AA seq
660 aa
AA seq
DB search
MGDGVTEYTARLQQQEKEIQSLSAEIESLKNPQSRSLSPRLEELREENTKLKYRLNILKR
TMQEERTRSSKSMMNINERLQEIFGEAIRASCPELDSPPLAVATSQQAKFGDYQCNSAMA
MAQMLKAKGMKVNPREISEKIIQNLPDNELIEKTEIAGPGFINIHLKKTFVSKLLSNLLI
NGVQPPPLATRKKVVVDFSSPNIAKEMHVGHLRSTIIGESTCRLFEFLGYDVLRLNHVGD
WGTQFGMLIAHLQDQFPDYLTVSPPISDLQAFYKESKKRFDDEEDFKKRAYQCVVKLQSK
DPDFIKAWNLICDVSRKEFQRVYDCLDITLIERGESYYQDMMTKVVKEFEEKGLMQLDEG
RKIVFVPGESIPLTIVKSDGGYTYDTSDLAALHHRLFEEKADIIIYIVDSGQSTHFQVVF
AAAQMIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEK
GRDKVLTPEELTKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLADIDEATLRKAAETSEVLLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCDY
LYELATTFTEFYDSCYCVEKDRQTGVVVKINMWRMLLCEATAIVMAKGFDILGINPVQKM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagacggtgtgaccgagtacacagccagactgcaacagcaggagaaggagatccag
agcctctctgcagagatcgagagtctaaaaaacccacagagccggagtctttctcctcgt
ctcgaagagctgcgggaggaaaacaccaagttgaagtaccgcctcaacatcctaaagagg
accatgcaagaggagaggactcgctccagtaaatccatgatgaacatcaacgagcggctc
caggagattttcggcgaggccatccgggcttcctgccccgagctggacagccctccactg
gccgtcgcgaccagccagcaggccaagtttggagactaccagtgcaacagtgccatggcc
atggcccagatgctgaaggcaaagggaatgaaagtcaacccgcgggaaatctcagagaag
atcatccagaaccttccagacaacgaactcatcgagaaaactgaaatcgcaggaccaggg
ttcatcaacatccacctgaagaagacgtttgtgtccaaactgttgagcaacctgctgatc
aacggagtgcagccccccccactggccaccaggaagaaggtggtggtggatttctcctct
cccaacattgccaaagagatgcacgtgggccacctgcgctccaccatcatcggcgagagc
acgtgccggctgtttgagtttctgggctatgacgtcctcaggttgaaccatgtgggagac
tgggggacgcagtttgggatgctgattgcccacctgcaggatcaattcccagactaccta
accgtctccccgcccatctctgacctgcaggccttctacaaagagtcgaagaagcgtttt
gacgacgaggaggactttaagaagcgagcgtatcagtgtgttgtcaaattgcagagcaaa
gatcccgacttcattaaagcctggaacctcatctgtgatgtttcccggaaagagtttcag
agggtttacgactgcctggacatcacgctcatcgagagaggagagtcgtactaccaggac
atgatgacaaaggtggtgaaagagttcgaggagaaaggcttaatgcagctggacgaagga
cgtaagatcgtctttgtcccaggtgagtccatccccctcaccattgtcaagtcggacggc
ggctacacctacgacacgtcggacctcgcagccctgcaccatcgacttttcgaagagaaa
gcagacatcatcatctacatcgtagacagtggacagtccacacacttccaggtggtgttt
gctgcggcacagatgattggctggtatgaccccaaggtgacccgggtggagcatgctggc
tttggagtggtgctgggggaagacaagaaaaagtttaagacccggtctggagacaccgtg
agactgatggacctgctggaggagggactgaagaggtccatggacaaactgaaagagaag
gggagagacaaggtcctgaccccagaggagctgaccaaagcccagagggccgtcgctttt
ggctgcattaaatacgccgacctctcccacaaccgcatcaatgactacgtcttctcgttt
gacaagatgctggatgaccgtggcaacacagcggcgtacctcctctacgccttcacccgc
atcaggtccatagctcgtctggccgacatcgatgaggccacactgaggaaagcagcagaa
acctcggaggtcctcctggaccacgagaaggagtggaagctgggaaagtgcatcctccgt
ttcccagagattctgcagaagatcctggacgacctgctgctccacacgctgtgcgactac
ctctacgagctcgctaccaccttcaccgagttctacgacagctgctactgcgtggagaag
gacagacagacaggtgtggtggtaaagatcaacatgtggaggatgctgctctgtgaagcc
acggccatcgtcatggctaaaggctttgacatcctgggcatcaaccccgtccagaagatg
tga
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