Siniperca chuatsi (mandarin fish): 122888405
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Entry
122888405 CDS
T08948
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122888405
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122888405
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122888405
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
122888405
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ribosomal_60s
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
122888405
NCBI-ProteinID:
XP_044078760
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Position
LG2:19861434..19909569
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AA seq
591 aa
AA seq
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MVKRTIRDGDLFPLFPLPGESLDLVRPWLRGSWLFLPRQHPSHPSAARRRRSQQLRGAEW
HRPISNSPQAPDKVDTGRGNNKTVRESSPELPEALFMMATNREHQVRHMTGFPRAMYPFT
FNSMRSHSPFDLLASSHLFGRFGADLPKEMAALSVETQSTSSEEMVPSSPSPPPPPRVYK
PCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQYCRLQ
KCFEVGMSKEAVRNDRNKKKKDVKEEVVLPENYELSGELEELVNKVSKAHQETFPSLCQL
GKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFTTLTIADQITLLKSAC
LDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTE
TGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIYTRRRRPNKPHMFPRMLMKVTDLR
GISTKGAERAVTLKTEIPGPMPPLIREMLENPEAFEDSSDSGDSAAAAPPAIQAIKQEEK
ATDESAVEEEEEEEEDDYWDEEKDRGTDSDGALCGEAAAGVQKKGVTVKTQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagagaaccatcagggatggggatttgtttcccctgtttcccctgccaggagag
agtctggacctggtcaggccttggttacgcggctcctggctcttcctccctcgtcagcat
ccctctcacccctctgcagcccgacggcggagaagccagcagctgagaggggctgaatgg
catcggcccatttcaaactcaccgcaggcccctgacaaagtcgacacaggaagaggaaac
aacaagacagtcagagagagttcacctgaactaccagaagcacttttcatgatggcaacc
aacagggagcaccaagtgcgtcacatgaccggcttccctcgtgctatgtacccgttcacc
tttaactccatgcggagccactccccctttgacctactggccagtagccacctcttcggc
cggtttggggcagaccttcccaaagagatggctgcattgtcggtggagacccagagtacc
agttcagaggagatggtgcccagctctccctctcctccacctcctcctcgtgtctacaag
ccgtgctttgtgtgccaggacaagtcgtctggttatcactatggagtgagctcctgtgag
ggctgcaagggtttctttcggcgcagtatccaaaagaacatggtgtatacctgccaccga
gacaagaactgtcagatcaacaaagtgacccgcaaccgctgccagtactgtcggctgcag
aagtgctttgaggttggcatgtccaaagaagcggtgcgtaatgacaggaacaaaaagaag
aaggatgtgaaggaggaggtggtgctgccagagaactatgagctgagtggagaactggag
gaactggttaacaaagtcagcaaagctcaccaagagacctttccatctctctgccaacta
ggaaaatacaccacaaattcaagtgctgatcacagagtacagctggacttgggcctgtgg
gataagttcagtgagctgtccactaagtgcattataaagattgtggagtttgccaagcgg
ctaccaggcttcactacgctcaccatcgctgaccagatcaccctcctcaaatctgcatgt
ctggacattctgatgctgaggatatgcactcgctacaccccagaacaggacacgatgact
ttctcagatggcctgactctcaacaggacccagatgcataatgctggcttcggcccgctc
acggacctggtgtttgcctttgctggtcagctgctgcctttggagatggacgacacagag
acgggcctactcagtgccatctgcctcatctgcggagaccgtatggacctggaggagcca
cagaaggtagacaagctgcaggagccgctgctagaggctctgaagatctacacccgccgc
agacgcccaaacaagcctcacatgtttccccgcatgctgatgaaagtcacagacctcaga
ggaatcagcaccaaaggtgcagaaagagccgtcacactgaagacagagatcccagggccc
atgcctccactgatcagggagatgctggagaaccccgaggccttcgaagacagcagtgac
tcaggggacagcgctgcagctgctccccctgccattcaagccataaaacaagaggagaag
gccacggatgagtcagccgttgaggaggaagaggaggaggaagaggatgactactgggat
gaggagaaagaccgagggacggacagtgatggggcactgtgtggggaggcggcagcgggc
gtgcaaaagaaaggtgtgactgtgaaaacacagtga
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