Siniperca chuatsi (mandarin fish): 122888470
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Entry
122888470 CDS
T08948
Symbol
igsf5a
Name
(RefSeq) immunoglobulin superfamily member 5 isoform X1
KO
K06786
junctional adhesion molecule 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04517
IgSF CAM signaling
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122888470 (igsf5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122888470 (igsf5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122888470 (igsf5a)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
CTX family
122888470 (igsf5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
VEGFR1-3_N_Ig-like
Ig_3
MpPF26
TED6
Adeno_E3_CR2
SCY_4732_
EphA2_TM
PRIMA1
Hum_adeno_E3A
Motif
Other DBs
NCBI-GeneID:
122888470
NCBI-ProteinID:
XP_044078879
LinkDB
All DBs
Position
LG14:complement(4786965..4801552)
Genome browser
AA seq
312 aa
AA seq
DB search
MTWNVGGYLVLTVLATDNISSSSKQFSARFCSSGDTSCVEFTIHNVTRRESGPVICSLQG
EYGSKTAQLYVQDSAVSEQFQLEPLHSTVLQGSDVQFKATVQGILQVMTWNVGGYLVLTV
LATGNISSSSKQFSARFCSSGDTSSVEFTIHNVTRRESGPVICSVQGEYGSKTAQLYVQV
PKPPDWTVLIALVVSIGGFALLVLLILGIIFCYKRRKEKQPNYQDEMSRRVRTQISVVDA
AGQRQGQANAGYVPEGQTSVELSDSGFFQANGSNILEMPDVVNSNQVGNDYSSAYNTVDK
SGFRKHRHATIV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacctggaatgtcggagggtatctggtcctcactgtccttgccaccgataacatatcc
tcgtcctcaaagcagttttctgccagattctgctccagtggtgacaccagctgtgtggag
ttcaccattcacaacgtcacccgcagggagtccgggccggtcatctgcagtttgcagggg
gagtatggatcaaagacagcacagctttatgtacaagattcagcggtgtcagaacagttc
cagctggagccgctgcattcaacagtgctacaaggctctgatgtgcaattcaaggccacc
gtgcagggaatattgcaggtcatgacctggaatgtcggagggtatctggtcctcactgtc
cttgccaccggtaacatatcctcgtcctcaaagcagttttctgccagattctgctccagt
ggtgacaccagctctgtggagttcaccatccacaacgtcacccgcagggagtccgggccg
gtcatctgcagtgtgcagggggagtatggatcaaagacagcacagctttatgtacaagtt
cctaagcctcctgactggactgtgctgatagctctggtcgtgtctatcggaggttttgct
ctgctggttttgctcatcctcggaatcatcttctgctacaaacgcaggaaagaaaaacag
cccaactaccaagatgaaatgagcaggagagtgaggacacagataagtgttgtcgatgca
gctggacagagacagggtcaagcaaatgcaggatatgtgccggagggtcaaacaagcgtc
gaactcagtgacagtggctttttccaggcaaatggctccaatattttggagatgcctgat
gttgtgaacagtaaccaggtaggaaatgactacagtagtgcctacaacactgtggacaaa
tcaggcttcaggaaacacagacatgccaccattgtgtaa
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