Siniperca chuatsi (mandarin fish): 122888524
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Entry
122888524 CDS
T08948
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04512
ECM-receptor interaction
schu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122888524
04518 Integrin signaling
122888524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
schu04091
]
122888524
Lectins [BR:
schu04091
]
C-Type lectins
Lecticans
122888524
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Insulin_TMD
DUF3377
Motif
Other DBs
NCBI-GeneID:
122888524
NCBI-ProteinID:
XP_044079027
LinkDB
All DBs
Position
LG14:complement(14788490..14847936)
Genome browser
AA seq
3132 aa
AA seq
DB search
MIWITSVAKMFYRLLLCFSVTGIVFAQPDSTGLFYALRSELSEDAILVANNGIRVPFGRS
VFIDPINDLVIQTQPGDRCSITVLDNDPLSQRPGHLSPKKFPCDFGPNDVTYSHYGSRSP
AKDRMRLQLRYDAQTETVIIPFMMEVEVVFTQLELLTKNMPLTVNNLKGISNPIDMKILE
FTYDRDSHKCEVASLSTGSALPRYGILIDGGKLSKMMDCDEFTQAGIRYEHTFDRKSPNR
DYVPMVVELHDKEGNLVKQEYFHLMIRIKEGEENTPPKPSFVSMMMMEISQFVMTALTPD
MLAAEDAESDPDELIFNITSPLSYEEGYIVSTDDRNLPITSFFQRDLRDLKIAYKPPSLD
SDTERIFQLEFEVVDTDGAVSDPFAFMIVVKPMNSLAPVVTRNTGQLLYEGQSRPLFSAH
NLEISDEDNLDTVTVTVVDGLRHGDLMVQGPQKKFFTPADLTTGVVVYQHDGSDTYSDNI
VFKMSDGQNEVEFLFPITIVPTDDEPPIINANTVLVLFRNQMMPISPLMLSAADIDSEDS
TIKFTIVPPFSSIGTVFLRQSDAPEDPSSWKFNSEDEVYEKEVTEWLQKDITDGKLFYKH
TGPHNTDTVMDQFVFTVQDDNDPPNESGKSVFIIRVLPVDDVPPELFPGTTLQMTVQEYK
LTHFSREVLHYTDMDSEDRDLKYVVIQPPIDTDENNPVAFGSLVLTDSPDTEVTEFTQAQ
INHHKISYSPPDVELGITAHVVQFRYTVEDTAGNSVEGAFTIYLQPVNNKPPQITNTGFT
VFERGVHIVSIAELDATDLDTESKQITFTLSQPPKHGQVQVAFTDLEKKGVFRLEDISEG
KISYTHGGEETMSDEFQLDVNDGIHVVTVTVRVNVKPVDDETPTVSLPVGTIGSHMDVLE
NRATEITTNVIQGHDDDTDDLQLTFIVEDPPVMGEILFKGVPATRFTQADIINGVVVYAH
TSGEIGLTSHLDGFNLTLTDMSDDWTVGGNKVNGVHVRVTILPVDNQAPEVGVGIQFSVI
EGEKYAIGPQHLNADDNDTPTDAILCTIIVQPTAGYVENISPAPGSEKSRSGTAISAFNI
RDIREGNIYYVQSIHKGVEPVEDRFTFRCSDGINFSENHFFPIVIIPANDEKPDIYLREI
VVMEGMNIVIDTPILNGDDADIPPEELIFIISKPPKHGAILNQLSTGSVLVTNFTLEQIR
EASSIIYEHDDSETTEDSFDVTLTDGKYSVQKTAMVLIIAVDDETPRMLINDGLEVEIGE
TKEINNKMLKATDLDSDDSTLTYIIRFEPGQGLLQRKTPSGSLENITLDMNFTQAEIDAG
LILYTHNGQEGIRDLVKFDVTDGINPLIDRYFYITVSSIDMVFPDVVSKGVSLREGGRVT
LTTDLLSTSDLNSPDENLVFTITRAPVRGHLECTDTPGMPIVSFTQLQLAGSKIYYIHTS
DDEVKMDSFEFEVTDGYNPIFRTFRISIVDVDNKKPVVTVNSLVVTEGQIKLISPFELTA
EDQDTAEQLLKFTVTQLPVHGKLLYNRSTPVTSFTKQDLNENLISYKHDGSESSEDSFSF
TVTDGTHTEFYVFPDTVFETWRPQTMKITIVALDNGVPQILVNKGAPTLKVLATGHLGFP
ISSKVLRAEDRDSSPASLVFYITTQPKHGYIVNLRQGNNSIHTFSQADIDDLNICYVLRN
EENATSDLFHFSVQDNGGNKLKRQQFRLDWSWISLEKEYYVVDEEDKFLEVVLRRRGYLG
ETSFIGIGTQDGSAKKEEDFKGKSQRQVQFNPGQTRATWRVQILTDGKYEQAETFQILLS
EPVMGVMEFPTAATVEILDPNDESTVFFPEQIHSVEEDVGELFIPVHRSGDISQELMVVC
YTQQGSASGTIPTTVLSYSDYISRPEEHSSILRFDKGEREKQCRLVIIDDSLYEGEESFN
VTLSLPVGGRLGMHYHTTKVNILEDMDDAPVFYFGEVEYYVDESDGYVEVKVWRTGTDLS
KPGTVTVRSHKAKPVSAEAGIDYVGISRNLDFSPGVSMQTFRVTILDDLGQPELEGTETF
EIILRMPGNGILGEPGKAAVFINDSVSDLPKVQFHEPVYTGEESDGQITATVYRSGDIRH
KSTVRCYTRQGSAQVASDFDERSNTDASIITFLPGEVKKPCTLSLVDDTLYEEGEELRLV
LGNPKSDSQFGASVGALNETLVKIKDTADKPIIRFFETKFSVSEPKEAGAVATVRIPVVR
VGDTSKVSVVRVHTKDGSAISGEDYYPVSQDIEFKQGDKEHVVEVAVLFDGVREMREAFT
LHLKPDENMVAETQVTKVIVYIEETNSMADVTFPSLPHVVSLLHYDDVARTPDNLHPPAG
YPVICVTACNTKYPDYDKTGSICVSEHINNTLTRYRWLISAPAGPDGVTSPMREVDFDTF
FTSSKMITLDSVYFQAGSRVQCAARAVNSNGDEGLELSSLIVTINQEEGMCQPRKMGTVG
AEPFSAKLRYTGADDPKHPNLIKVTVTMPHIDGMLPVISTRPLMNFELTLSPDGTRVGNH
RCSNLLDYEEVTTGHGFITASTRSPENMGDTAAYQFSNSLRGNSTLRFYRNLNLEACLWE
FTSYYHMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGTGGWQHFDLQS
ELRLTFVYDTAILWKDGIGSPPQAELQGALYPTSMRINDQGRLVVNFRTKAHFRGLFMES
HSGGRIKMAATSMSSMVMSVDHPSLTFNLTLVRSEPTYNQPVQQWTFTSDFAVRDYSGTY
TVKLIPCTTAQNMEYTVPPVCSPREPVNFDLDIRFQQVSDPVAVEFSLNTQMFLLSKRSL
WLSDGSMGFSQESDIAFSEGDTIYGRVMVDPVQNLGDSFFCSIEKVFLCTGADGYVPKYN
PTKFEFGCLADSPSLLYRFKILDKAQPETQARVFGDVSFNAVLAVDDPSALTLVRQPGSD
GFRLDSTAMFQVAAGREWYIHTIYTVRSKENANRRIGKRSLEYHSLVSTSNDLTLTPSSG
KGHRSRRSAGDDSPEIAEDIGADNNRGTNIMHIALDRKRRAGGSSELFANGLEPSELNAD
KEEEGLVTVVGALVGLLLTVLIIVTVVLVLRTRQKDGKEGWREGVQEVVKGSVSTEPMLV
VRMQDCHNSSEV
NT seq
9399 nt
NT seq
+upstream
nt +downstream
nt
atgatttggatcacatccgtcgcaaaaatgttctatagacttcttctgtgtttttcagta
acaggtattgttttcgcgcagcctgacagtactggattattttacgcactgagatctgaa
ctgtcagaagatgcaatcttggtggctaacaacggaatacgtgtgcctttcgggagatcg
gtcttcatcgatcccatcaatgatttggtgattcagacgcagccgggagaccggtgcagc
atcaccgtcctggataatgatccgctctcacagagaccggggcatctctcccccaaaaag
tttccgtgtgatttcggtcccaatgatgtgacatactcccactacgggtcgagaagtccg
gctaaagacagaatgaggctgcagctcaggtatgacgcgcaaaccgaaaccgttattatc
ccctttatgatggaggttgaagtagtttttacgcagctagagttactcaccaaaaacatg
cctctcactgtcaataatctcaaagggatcagtaaccctattgatatgaagattttagag
tttacttatgacagagactctcataaatgtgaggtggcatccttgtctaccggcagcgca
ttgcctagatatggaatactcattgatgggggtaaactttccaaaatgatggactgtgat
gaattcacacaagctggcatccgctacgagcacacgtttgaccgcaagtctcccaacagg
gactatgttcccatggttgtggagctgcatgataaggaaggcaacctagtgaaacaggag
tatttccatcttatgattcgcatcaaagagggagaagaaaacactccccccaagcccagc
tttgtgtccatgatgatgatggagatcagccagtttgtcatgacagccctcacccctgat
atgctcgctgctgaagatgcagagtcagacccagatgagcttattttcaacatcacatct
cccttatcttatgaggagggctacatagtcagcactgatgacagaaacctccccatcacg
tctttcttccagagagacttgcgtgatctgaaaatagcttacaagcccccctccctggac
tcagacactgagaggattttccagcttgagtttgaggtggtagacacagacggggccgtc
tcagaccccttcgctttcatgatagttgtgaaaccgatgaactctctggcccctgttgtg
acacgtaacacgggtcagctgctgtacgaggggcagtctcggcctctcttcagcgcccac
aacttggagatcagcgatgaagacaacctggacactgtcaccgtcacagtggtggatggg
ctgcgccacggggacctcatggtgcagggcccccaaaagaaattcttcacacctgctgac
cttacaacaggggttgttgtgtaccagcatgatgggagcgacacatacagcgacaacatt
gtcttcaagatgtcggatggacaaaacgaagtagaattcctttttcccattacaattgtt
cccactgatgacgagccaccgattataaatgccaacactgtcctggtgctgttcagaaac
cagatgatgcctatatctcccctcatgctcagcgctgccgatattgactctgaggactcc
actattaaattcaccattgtcccccccttttcttctattggcactgtgttcctaaggcag
tcagatgccccagaggacccctcctcttggaagttcaactctgaggatgaagtgtatgag
aaggaggtgacagagtggcttcagaaagatatcactgacgggaagttgttttacaagcac
acaggccctcacaacacagataccgtcatggatcagtttgtgttcacagttcaggatgac
aatgacccccctaatgagtcaggaaaaagtgtatttataattcgggttttacccgtagat
gacgtaccccccgagctgttccctggcaccaccctgcagatgaccgttcaggagtacaag
ctcacccactttagcagagaagttctgcactacactgatatggactctgaggaccgtgac
ctcaaatacgtagttatccagcccccgatagataccgatgaaaataacccagttgcgttt
ggttctttggttctgacagacagcccagacaccgaagtcactgagttcacccaagctcaa
attaaccatcataagatctcctacagccccccggatgttgagcttggaattacagcccat
gtcgtgcagtttcgttacactgttgaagacacggctgggaacagtgtagaaggggctttc
actatctacctccagcccgtcaacaataaaccccctcagattacaaacactggctttact
gtgtttgaacgtggtgtgcacatcgtcagtattgctgagctagacgccacagacctcgac
acagagagtaaacagattacctttactctaagccagccccctaaacatggccaggtccag
gttgcattcactgacctagagaaaaaaggggttttcagacttgaggatatctcagagggg
aagatatcatatactcatggtggggaggagacgatgagtgatgaatttcaactggatgtc
aatgatgggatccatgttgtaaccgtgacggtcagagttaatgtaaagcctgtcgatgat
gaaactccaacagtcagcctgcctgtgggaacaatcggctctcacatggatgtgctggaa
aacagagccacagaaatcacaactaatgtcattcaaggccatgatgatgacacagatgac
ctccagctgacctttattgtggaagatcctccagttatgggtgaaatattgtttaaaggg
gtgcctgccactaggtttacacaggctgatataattaatggtgtggttgtgtacgcacac
accagtggtgaaataggtctcacctctcatctggatggcttcaatttgactctcacagac
atgtccgatgattggacagtaggtggcaataaggtcaacggagtgcacgttcgagtcact
atccttcctgttgacaaccaggcccctgaggtcggagttggaattcagttcagtgtcatt
gaaggggagaaatacgccattggcccccagcacttgaacgctgatgataatgacactcca
acggatgctatcctttgcaccatcattgtccagcccactgccggctatgtggaaaatata
tcacccgccccaggctcagaaaagtctaggtcaggaacagctatcagtgcttttaacatc
agagatatcagggagggcaatatctactatgtacagagcattcacaaaggggtagagcca
gtggaagacagattcacatttaggtgctctgatggcatcaatttctcagagaaccatttc
ttcccaattgttatcatcccagcaaatgatgaaaagccggacatttatttgagggagata
gtggtgatggagggtatgaacatcgtcatcgacactccgattctgaatggggacgatgct
gatattccacccgaggagctgatattcatcatttccaaacctcccaaacatggtgccatt
ttaaaccagctatccacaggctcagttttggtgactaatttcactttagagcagattagg
gaggcatcaagtattatttatgagcatgatgactcagagacaacagaggacagctttgat
gtcactctgactgatggaaaatactctgtgcagaaaacagccatggttttgatcattgct
gttgatgacgagacacccagaatgctcatcaacgatggtcttgaggtggaaattggggaa
accaaagagatcaacaacaaaatgctcaaagcaacagatttagattcagatgacagtacg
cttacatatatcatccggttcgagcctggtcagggtctcctgcagagaaaaaccccatct
gggtctctggagaacatcacgctagacatgaatttcacacaagctgaaattgatgcaggg
cttatactttacacacacaacggtcaggagggcatccgagacttggtcaaatttgacgtc
acagatggaataaacccattaattgatcgttacttctatatcactgtgagcagtattgac
atggtattccctgatgtggtcagtaaaggcgtgtctctgagagaaggtggcagagtgact
ttgaccacagatcttctcagcaccagtgacctcaacagccctgatgagaacttagtcttc
accatcacaagggcccctgtcagaggtcacttggagtgtacagatactcctgggatgccc
attgtgtcttttactcaactccaactggctggaagtaagatttactacatccacacctca
gacgatgaggtgaaaatggacagttttgagtttgaagtcactgacggctacaatcccatt
ttcagaacattcagaatctctatagtggatgttgataataagaaaccagttgttactgta
aatagtttagttgtcacagaagggcagattaagctgatttcaccatttgagctcactgct
gaggaccaggatacagctgagcagttgctgaaattcaccgtcacccagctgcctgttcat
ggtaaactcctctacaaccggtccacgcccgttaccagcttcaccaaacaagacctcaat
gaaaacctcatcagctacaaacacgacggaagtgaatcatcagaggactccttctccttt
actgtcactgatggcacacacactgaattttatgttttccccgacactgtgtttgagact
tggcgtcctcaaaccatgaagatcaccattgtggcgctggacaacggcgtcccccagatc
ctggtgaataaaggtgcccccactttgaaggtcctggccacaggtcacctggggttcccc
attagctccaaagtgctgagggcagaggacagagacagcagcccggcctccctggtgttc
tacatcaccacccagcccaaacatggttacatcgttaacctgagacaaggaaacaactcc
atccacacatttagtcaagctgatattgatgacctgaacatctgctatgtgttgcggaat
gaagaaaatgcaacatctgatctcttccatttctccgttcaggataacggtgggaacaag
ctcaagagacagcagttccgtctggactggtcttggatctctctggagaaagagtactac
gtggtggatgaggaggacaagtttctggaggtggtgctcaggcgaagaggctacctggga
gagacatctttcattggcattggcacccaggatggtagtgcaaagaaggaggaggatttc
aagggtaagtcccagaggcaggtccagttcaacccgggacagaccagagccacgtggcgg
gttcagatactgactgatgggaagtacgagcaggcggagactttccagattttgctatcg
gagccagtgatgggagtgatggagttccctaccgcagcaacagttgagatcctggatcct
aatgacgagtcgaccgtgttcttccctgaacagatccactcagtggaggaagatgttgga
gagcttttcatcccggtgcaccgcagtggagacatcagccaggaactcatggtggtctgc
tacacacagcagggttctgcctcagggacgattcccaccaccgtcctgtcttactcagac
tacatctcccgtccggaggagcacagcagcatccttcgcttcgacaagggtgagagggag
aagcagtgtcgtctggtgatcattgatgactctctgtacgagggagaagagagcttcaat
gtcactctgtcactgcctgttgggggacgtctgggaatgcactaccacaccaccaaagtc
aacatcttggaagatatggatgatgctccagtgttttactttggagaggtagagtattat
gtggatgagagtgatggatatgtcgaggtcaaagtgtggaggacaggaactgatctgtcc
aagcctggcaccgtcaccgtccgctctcacaaggccaagcctgtatctgcagaagctggt
attgactatgttggcatcagtcgtaacctggacttttccccaggcgtcagcatgcagact
ttcagggtcaccattctggatgacctgggacagccggagctggaggggactgagaccttt
gagattatcctacgtatgccagggaatggcatcctgggagaacctgggaaggctgcagtc
ttcatcaatgactctgtgtctgacttgccaaaggtccagttccacgagccggtgtacact
ggagaggagagtgacggtcagatcacagcgacagtttatcgcagtggagacatcagacac
aaatccactgtccgctgttacacccgtcagggctctgcacaggtcgcctctgactttgat
gagcgatccaacacagatgcatctatcatcactttcttaccaggcgaggtgaagaaacca
tgtactctgtcactggttgatgacacgctgtacgaggaaggagaagagctgcggttggtc
ttagggaacccaaagagcgactcacagtttggcgcatcagtgggtgctctgaatgagacc
ctggtgaaaatcaaggacacagctgacaaacccatcatccgtttttttgaaaccaagttc
agtgttagtgaaccgaaggaagccggcgctgtggcaactgtgaggatccctgtggtacga
gtgggtgacacatccaaagtgtcagtggtccgtgttcacaccaaagatgggtcagctatc
tcaggagaggactactaccctgtgtctcaagacattgaattcaaacaaggggataaggaa
catgtggtggaggtggctgtgctatttgatggagtcagagagatgagggaagcctttact
ctccacctgaagcctgatgaaaacatggtggctgaaactcaggtaactaaagtgatagtt
tacattgaggagaccaacagcatggctgacgtcaccttcccctccctgcctcatgtggtg
tcgctgctccattacgacgacgtcgccaggacaccagacaacctccacccaccagctggc
taccccgtcatctgtgtcacagcttgcaacacaaaatacccagactatgacaagacgggc
tctatctgtgtcagcgagcacatcaacaacaccttgacccgctaccgctggctcatcagc
gccccagctggccctgatggcgtcaccagtcccatgagggaggtggactttgacaccttc
tttacgtcctccaagatgatcacactggactcggtatacttccaggcaggctccagggtc
cagtgtgctgctagggccgttaattctaacggggatgagggtttagagctcagcagcctc
attgtcactatcaaccaggaggaaggtatgtgtcaaccacgtaagatggggactgttggc
gctgagcctttctctgccaagctacgctacactggagcagacgacccgaaacaccccaac
ctcatcaaagtgactgtcaccatgcctcacatagatggcatgcttccggtaatctccact
cgccctctcatgaactttgagctgactctcagtcccgatggaacccgggttggaaaccac
cgctgctccaacttgcttgactacgaggaggtcaccacaggtcacggcttcatcaccgct
tcgacgcgcagccctgaaaacatgggagacacagcggcatatcagttcagcaactctctg
cgggggaacagcacattgcgcttctacaggaacctcaacctggaagcctgtctctgggag
ttcaccagctactaccacatgtctgagctgctcactgactgcggaggcaccatagggact
gatggacaggtgcttaacctggtccagtcttacgtgaccctgcgtgtgcctctttacgtg
tcctatgtgttccactcccccgtgggaaccggtggctggcagcactttgacctgcagtct
gagctgcgcctcactttcgtgtacgacacggccattctctggaaggacggcatcggcagc
cccccgcaggccgagctacagggtgcgttgtatccgaccagcatgcgtatcaatgaccag
ggacgtttggtggtaaacttccgcaccaaggctcatttcaggggtttgtttatggagtcc
cattctggaggcagaataaaaatggctgcaacctccatgtcatccatggtgatgagtgtg
gatcaccccagcctgacctttaacctcaccttagtgaggagtgagcccacctataaccag
ccagtccagcagtggactttcacctctgacttcgctgtaagagactactccgggacctac
acagtgaagctgatcccctgtacaacagcccagaatatggaatacactgttccacctgtc
tgcagtccaagagaaccagtcaacttcgatctagacatccgattccagcaagtgagcgac
ccagttgccgtggagttcagtctgaacactcagatgttcctgctgtccaagaggagctta
tggctctctgatggctccatgggtttcagtcaggagagtgacatagccttttctgagggt
gatacgatctacggccgtgtgatggtggaccctgtgcagaacctgggagactctttcttc
tgtagcatagagaaggtgttcctctgcactggtgccgatggatatgtaccaaagtacaac
ccgaccaagtttgaatttggctgcctggctgactccccatcattgctctatagattcaag
attcttgacaaggctcagccagagactcaggcccgtgtgtttggtgatgtcagtttcaat
gctgtgctggcagtggatgatccatcagccctgaccctcgtcagacagccagggtctgat
ggctttaggttggactctacagccatgttccaggttgctgcaggccgtgagtggtacatt
cacaccatttatacagtacgctccaaagagaatgctaacagacgcattggaaagcgcagc
ctagagtaccactccttggtttccacaagcaacgatctcaccttgaccccatcaagcggc
aaaggtcatcgctccaggaggtcggctggcgatgacagcccagagattgctgaggatatc
ggagcagacaacaaccgcggtaccaatatcatgcacatcgctttggaccgcaagcgaagg
gcaggggggtcaagtgagctgtttgccaatgggctggaacctagtgagctgaacgcagat
aaggaagaggagggtctggtgactgtggtgggggcattggtggggctgctgctgactgtc
ctcattattgtcactgtcgttctagtgctgagaaccagacagaaggatgggaaggaagga
tggagggagggggtgcaggaggtggtgaaagggtctgtcagtacggagcccatgttggtg
gtgaggatgcaagactgccacaacagctcagaggtctga
DBGET
integrated database retrieval system
