Siniperca chuatsi (mandarin fish): 122888574
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Entry
122888574 CDS
T08948
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122888574
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Protocadherins
122888574
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
122888574
NCBI-ProteinID:
XP_044079134
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Position
LG14:complement(8519864..8525959)
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AA seq
991 aa
AA seq
DB search
MDTQGAKKRLCGKWHVLCRFVLFTCFLDAVWGQIRYSIPEELEHGAFVGNIAEDLGLDLD
KLSARRFRIVSGAKKQYVEVNLENGVLFVNERIDREELCEQSLSCSFHLQVVIESPLELY
RVEMEILDVNDNSPSFPWTEFNLDISESAAPGSRFPLESAQDLDVGSNSLRTYLLSVNEH
FLLDIQTRSDGSKFAELVLQNPLDREQQSAHQMVLTAVDGGAPERSGTAQIDITVLDAND
NAPVFEQSFYRVRLAENAPKGTVVIKLNASDLDDGPNADITYSFSGHAPIKVRQLFSVDS
RTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDKNDNLPEVILTSVST
PVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTCDFLDRET
VAEYNITLTARDMGSPPLFTRKTILVQVSDVNDNAPHFKQPSYTVYLTENNAPGASVCSV
TALDPDSGQNAYLSYSILEGDIQGMPVSTYVSINSDNGNIYALRSFDHEQLQNFQITVQA
QDAGFPPLNNNVSVNIFILDQNDNAPVIVSPVRQNGTAPSEAVPRSVDAGHIVTKISAVD
ADAGQNSRLFYQMLQATDPSLFSIALYTGEIRTIRQLVEKDPRRHSLVILVKDNGQPPLS
ATVSIILSVVDSLPDSQPDLGDLSLSPHHSSNFTLYLIVSLGAISFTFLVAIIVLVAVRR
LKGRPSNRESDVPSISGCCCCCSRTETSTTTEVFKKSNCNVLVSTGASGCTEANSNGALP
QVYCYKMCLTPESSKSDFMFLKPCSPVMSVQQNNAKSTDYLTSGWSALDRNELANNRAAT
PNELKYSNKDWTWTKNQRNSAYKRYSSANMEGTLSRHQKYDADGFSCSVAPQYWTWGNHM
NDCKMSLQEGAVPNYSWAPKYTQPHSEPPDYQHNVYIPGTTSDYSTLKLAPRGELDVYST
FSTFGKKKRFISNYEQSFDRDDGLISNDIFK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggacacacaaggcgcgaagaaaagactttgtgggaagtggcatgttttgtgccgtttt
gtgttgttcacttgtttcttggatgcagtctggggacagattcgctactcaattcctgag
gaactggagcatggagcttttgttggcaatattgcagaggacctgggcttggatttggac
aagctctctgcgcgcagattccgcatagtctcaggtgccaagaagcaatatgtggaggta
aatttagaaaatggagttttatttgttaatgaaagaattgatcgtgaagaactatgcgag
cagagtttgtcctgttcttttcacttgcaagtggtcatagaaagccctctggagctgtac
agggtagaaatggaaattctggacgtgaacgataactctcctagtttcccgtggactgag
tttaatctggacatatctgagtccgctgcgccaggatcccgtttcccactcgagagcgca
caagacttggacgtcggatccaactcgctccgcacctatttgctgagtgtaaatgagcat
ttccttttggatatacagacgcgcagtgatggcagtaaatttgcagaactagtcctacaa
aacccactggacagagagcagcaaagtgcgcatcaaatggttctaacggcggtggatggg
ggcgcgccggagagatccggcactgcgcaaattgatatcaccgttttggatgcaaatgat
aacgcgcctgtgtttgagcagtcgttttacagagtgagacttgctgaaaacgcacctaaa
ggcacagttgtcataaaacttaatgcgtccgatttagatgacggtcccaatgctgatatt
acctattcattcagtggccacgctcccatcaaagtgcgccagcttttcagcgtagactcg
cgcacgggggaaatcaaagtcaagggagtgatagattatgaaaaggccaggatgcatgaa
atttatgttcaggctaaagataaaggcccctccgctgtggcggttcactgtaaagtgctg
gtgaacgttttggataaaaatgacaaccttccagaggtgattttgacatcagtgtccaca
cctgtgcaggaggacgcgcccccgggaacggtgatagccgtcatcagcgtgatggacaaa
gactcaggtgaaaacgggaatgtggactgtgagatcccccatcacgtcccatttcagctc
cactcatcctttaagaactactatacattagtaacttgtgattttctggacagggagaca
gtcgcagagtacaacatcacacttaccgccagagatatgggctctccacctctattcacg
aggaaaactattttagtgcaagtgtctgacgtgaatgacaacgcgcctcacttcaaacag
ccttcatatactgtgtatttgactgagaataacgcgccgggagcatcagtttgctcggtg
actgcactggatccagattctggtcaaaatgcatacctctcctattctatcctggaaggt
gatatacagggaatgcctgtgtccacatacgtgtccataaactcagacaacgggaacatt
tacgcgctgcgatcctttgaccacgaacaacttcaaaactttcagatcacagttcaagct
caagatgccggttttccgcctctgaacaacaacgtttcagtgaatatctttattttggac
caaaacgacaatgcacctgtaattgtgtcaccagttcggcaaaacggcacagcaccaagc
gaagcagtgcccagatcagttgacgctggtcacattgtcaccaaaatcagcgcggtggac
gcagacgcaggtcaaaactcgcgtcttttttatcaaatgctccaagcaacagacccgagc
ttgttcagcattgctctgtacacaggcgaaatcaggacgatacgccagttagtggagaaa
gaccccaggaggcacagcctggtcattctcgtgaaggacaatggtcagccacccctctcg
gccacagtttccatcattctgtcagtggttgacagcctgccagattcgcagcccgatttg
ggtgacctgtcactaagcccgcatcacagctccaacttcaccctgtacttaatcgtgtct
ctgggcgcaatctccttcacatttctggtggctattattgtcctggttgcagtgcggaga
ctgaagggcagaccgtccaaccgagagtccgacgtcccctccatcagcgggtgttgctgc
tgctgctctcgcacagaaacatccaccaccacagaggtgttcaaaaagtccaactgtaat
gttctggtgtccacgggcgcgtccggctgcacggaggcaaacagcaacggcgcacttcct
caggtctactgttacaaaatgtgtctgacaccggaatcgtccaaaagtgacttcatgttc
ctcaagccctgcagtccggtaatgtcagttcaacagaataatgccaagagcacagattac
ctgacctctggctggagcgcactggaccgtaatgaactggccaacaacagagcagcaacc
ccaaacgagctcaagtattcaaacaaggactggacctggaccaagaaccaacgcaactca
gcatacaagaggtatagctcagcaaatatggagggcacgctttctcgtcaccaaaaatat
gatgctgatgggttttcctgctccgtagcaccacagtactggacctggggaaaccatatg
aatgactgcaagatgtctcttcaagagggagcagttcctaactactcatgggctccaaag
tacacccagcctcattctgagccaccagactaccagcacaatgtatacatccctggcacc
acgtctgactacagtacgctgaagttggcacccagaggagaactggatgtgtacagcact
ttctctacttttggaaagaaaaagagattcatctcaaactatgaacaatcttttgacaga
gatgatggtctcataagcaatgatatcttcaaatga
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