Siniperca chuatsi (mandarin fish): 122888605
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Entry
122888605 CDS
T08948
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
schu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122888605
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122888605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122888605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122888605
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
122888605
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122888605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
TonB_N
Clp_N
YihI
Motif
Other DBs
NCBI-GeneID:
122888605
NCBI-ProteinID:
XP_044079181
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All DBs
Position
LG14:complement(21256016..21280413)
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AA seq
369 aa
AA seq
DB search
MSSRGGKKKLTKTSRSTKAGVIFPVGRMLRYIKRGLPKYRIGVGAPVYLAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAIANDEELNQLLKGVTIAAGGVLPNIHPELLAKKRGA
KGKLETPVSPAPEKKPKPVKKTATKKLSGKKAGGKAKKQGEVSKAASADSTTEGSPVDSF
TVLSTKSLFLGQKLNLIHSEVSNLAGFDVEGVINPTNAELELKDDLGSALEKKGGKEFID
ALQELKKKNGPLEVAGAVLTAGFGLPAKYVIHCNSPGWGSDKCEELLDKTVKNCLALADE
KKLKSVAFPSIGSGRNGFPKQTAAQLILKAISSYFVATMSSTIKTVYFVLFDSESIGIYV
QEMAKLEAS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccgaggaggaaagaagaagttgaccaagacgtcccggtccaccaaggccggg
gtcatcttccctgtgggacgcatgctgcgctacatcaagaggggtctgcccaaatatcgc
attggggtgggagcgcccgtctacctggctgctgtcctcgagtatcttactgcggagatc
ttggagttggcaggtaatgcagccagagacaacaagaagggtcgtgtcacaccacgacac
atcctgctggccatcgccaatgatgaggagttgaaccagttgctgaaaggtgtgactatc
gcagcaggtggagtcctgcccaacatccatccagagctgctggctaagaagagaggagca
aagggaaaactggaaacacccgtctcacccgcccccgagaagaaacccaagccggtcaag
aaaacagcaaccaagaaactgagtgggaaaaaggcaggagggaaggctaagaagcagggt
gaggtgagcaaggcggcgtcagcagacagcaccacagagggatctccagttgacagcttc
accgtgctctccaccaagagcctcttcctgggtcaaaagctgaaccttatccacagcgag
gtcagtaacttggctggctttgacgtggagggggtcatcaaccccaccaatgctgaactt
gaacttaaagatgatctaggctctgctctggaaaagaagggagggaaggagttcattgac
gcgctgcaggagctgaagaagaaaaacggccccctggaggtggctggcgctgtgttgacc
gccggcttcggcctgcctgccaagtatgtcatccactgtaacagtccaggctggggctct
gacaagtgcgaggagttgctggacaagacagtgaagaactgcctggctctggccgacgag
aagaaactcaagtctgtggctttcccctccattggtagcgggaggaatggtttcccgaag
caaacggcggcccagctgatccttaaggccatctccagctactttgtggccaccatgtct
tccaccatcaagaccgtctactttgtgctgtttgacagcgagagcatcgggatctacgtg
caggaaatggccaagctggaggcaagctaa
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