Siniperca chuatsi (mandarin fish): 122888664
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Entry
122888664 CDS
T08948
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122888664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122888664
03036 Chromosome and associated proteins [BR:
schu03036
]
122888664
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122888664
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122888664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
122888664
NCBI-ProteinID:
XP_044079308
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All DBs
Position
LG14:10007768..10035089
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AA seq
1918 aa
AA seq
DB search
MIFSFQIPSTTTSKLNVLVNKLHEYLAHSAIEDSNGTPASEDAHGLTNRSCSVGTSTGHA
AAEAGVDTKYSRRKPSVVIKHSGLDESGDSNASEDVDLPVNANGHLDITRLPKGTVLVRP
EPVDNGRDDFRGPEFRSRKSGVLRKEFSRRRGGVEHTGIVSCTACGRQVNHFQRDSFYRH
PALKVLICKSCYKYYSSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLG
RKELSGILESKWYCYVCSPEPLFDLVMACDSVLENMESLWHQQRRRNRVEPEKSELYTML
PHLPQNIPLDKWDHTGMDGNVVFNYNTLQISKDITKKAKHLVDSTNILNRTFVNFIHSVT
TNKRTPGVRNLYLKSFLSVVKGLRKSLTALEDSLKEEFSDLDVLSCWEKFLSEDFDTQPE
TEADTELDISNERCLSDLQKLAAEHLEDDDSDSKGFTDGRSAHECPGGDMESDSHEARQR
VQKIGLKLSESGVNMTKKLVVKLTPVPMEQEPFSDTPKMKEDIHMKDKKSELKNVSEDEE
TGVLGAKVDNKISNDNSSASLHLEEEQGNRRSPRLKTTPLRRPSDVKTKTSLSAADSDSD
TDPEETPSTVPAKNTEEQSLSRTRDDSDSDEVPAALLERAAISQSSDEPQSDEDGGKAST
KVAKKCLFWLTKNTPISPEKMRRKRKMLERSPEPDRRVKSRGESGTDSSSDEQNSQKKIQ
HMNTLRSIGKPHLVKREDEGVARKQSRIQAGKCKTKSCQEAMESSSSSSDDEHDDDSGSD
GSDQKIQAITEDVSLLGAAPFHQSSGDEEQSGPSWAAEEDDDPENRIAKKMLLAQIKANY
SSGDDISSDEETQEEESESEGDEVKQGNEDNGTDENGEDFASESSGSTYDGPTSRHHLLR
HKLTLDEGTSSDKAVAESEVGKQESKQRASSKHLSSDSESDGDSNESDLEDLGMSEELSQ
SEDEAGEDRLKSSTKVKEAPCSYEKKKHVPCIWLSDSSSEKQSDKEDQDEEMSDSKGTPK
GRKKIRKIMEDMNLRAETQEALREEEERCKRLADREQQMEDRREITVIVDELSQMGCPIT
TKLVLDQDEETKNPLVQVHGSLVTRLKPHQVDGVQFIWDSCCESVKKANSSPGSGCILAH
CMGLGKTLQMVTFLHTVLLSENLKFRTALVVCPLNTILNWVNEFKKWQDNMGQDKVQVTE
LATIKHLPERLRALQSWQREGGVMIMGYEMYRILSLAQKINDEEKKKELKSILVNPGPDF
VVCDEGHILRNEASNIFKAMNAIKTQRRVVLTGTPLQNNLEEYHCMVNFIKKNLLGSLGE
FRNRFINPIQNGQCADSTPKDVRIMKKRAHVLHAMLAGCVQRRDYSELTQFLPPKHEYVL
AVRVSPLQYQLYRYYLDHFTGVGSITNRAKVRTGANLFKDFQVLGRIWTHPWCLQLSYIS
KENKGHFEKTKQVKAAALLRNEETTVAERCSGPRENEGNNDDSSAAVIVDVSKGAPEVEA
EKATISSRSQSLDEDWFKNQLSERDSKILEHSGKMVLLFEILRMAEDLDEKVLVFSQSLI
SLDLIENFLEASHHARDTSSFKAGSWIKNVDYYRLDGSTSAALRKKWTDVFNNAANVRGR
LFLISTKAGSLGINLVAANRVIIFDASWNPSYDVQSIYRVYRFGQLKQVFVYRFLAQGTM
EEKIYDRQVTKQSLSYRVVDQQQIERHFTLFELTELYTFEPDLLDDPNSKKSKRTTSVVP
KDTVLAQLLQTCKDQIVSFHEHESLLDHKQEEELSEAERKAAWAEYEAESNTTNLPVTLR
QDTLDMKTNEQLLELLNKSRANVSVAFLSLQRMRSHSNEDYMLRVLQQYPLLPEAEVKVK
AEIWKLCDQKEQERRRAFYRDVLAQQQSLTLSIQAILNNRRNQGMKTTVTTVNQPGQT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgatattttctttccaaattccaagcaccactaccagcaagcttaatgtattggtcaac
aaactgcatgagtacttggctcattctgctattgaggacagcaatggcacaccagcctca
gaggatgctcatggtctgacaaacagaagctgttctgtgggaacctcaacaggtcatgct
gcggcagaggcaggagtggataccaaatactcaagaagaaaaccttctgttgtcataaag
cactctggactggatgaatctggtgactcaaatgcaagtgaggacgtggatttaccagtc
aacgcaaatggtcaccttgatatcactagattgccaaaaggcactgtgctagtgaggcct
gaacctgttgataatggaagagatgacttcaggggaccggagtttcgaagccggaaatca
ggcgtactgcggaaagagttttcaagaagacgtgggggagttgaacacacgggaattgtc
agttgcaccgcatgtggccggcaagttaatcacttccagagagattctttttatcgacat
ccagctctgaaagtacttatttgcaagtcctgctacaagtattactcaagtgatgacatc
agtaaggatggagatggaatggatgagcaatgcagatggtgtgctgaaggaggaaacttg
atctgttgtgacttctgtagcaatgccttctgcaagaagtgtattttaagaaatttggga
aggaaggagctgtctggcatcttggagagcaaatggtactgttatgtgtgtagcccagag
cccctttttgacctggttatggcctgtgacagtgtccttgagaacatggagagtctgtgg
catcagcagcgtaggaggaaccgagtagagccagagaaatctgaactttacaccatgttg
ccacacttaccacaaaacattcctttggataaatgggatcacactggtatggatggtaat
gtcgtgttcaactataacacactgcagatttccaaggatattaccaaaaaggccaaacat
ttagtggactccacaaacatcttaaaccgaacatttgtcaatttcattcattctgtgaca
acgaacaaacgaacacctggtgttcggaatctgtatctgaagtcttttttgtcagtagtt
aaaggcttgcgaaaatcacttacagctctcgaggatagcctaaaggaagaattcagtgac
ttggatgtcttgagctgttgggaaaagttccttagtgaagactttgatacacaacctgaa
acagaagcagacacagagctggatatttctaatgaaagatgcttgagtgacttgcagaaa
ttggcagctgaacatttggaagacgatgattctgactccaagggcttcacagatgggaga
agtgcacatgaatgccctgggggagacatggagtcagattcacatgaagccagacagagg
gtacaaaagattggcctgaagctttctgaaagtggggtcaacatgaccaaaaaactagta
gttaaacttacacctgtacctatggagcaggagccattctctgataccccgaagatgaag
gaggacatccacatgaaggataagaagtcagagttaaagaatgtatcagaagatgaagag
acaggtgttttaggtgctaaagttgacaacaagataagtaatgacaactctagtgcatct
ctacacctagaggaggaacaaggcaatagacgatcacctcgcttgaagacaacacctttg
cgtcgaccaagtgatgtcaagaccaaaacgtctctttcggcagcagacagtgacagtgac
actgaccctgaggaaacccccagcacagtaccagccaaaaacactgaagaacaaagtctg
agcagaacaagagatgactctgactccgatgaagtccctgcagctctgcttgagcgagca
gctatatcacaaagctctgatgaaccccagagtgatgaggatggtggaaaagcgtcaact
aaggtggccaagaaatgtctcttttggctcactaagaacaccccgatctcaccggagaag
atgcgccgcaaacgcaagatgctggaacgttcccccgaacctgacagaagagtaaaatct
cgaggggaaagtgggacagattcctctagtgatgagcaaaactcacagaagaaaatacaa
cacatgaatacgctgaggtcaatagggaaacctcatcttgtcaaaagagaggatgaaggt
gtggctagaaagcagagtaggatacaggctgggaagtgtaagacaaaatcttgtcaggaa
gcaatggagtcatcatcctcatcaagtgacgatgaacacgatgatgactctggaagtgac
ggaagtgatcagaagattcaggcaatcaccgaagatgtgtccttactgggggcagcacca
ttccaccaatcatcgggagatgaggagcaatctgggccctcgtgggcagcagaagaagat
gatgatccagaaaatagaatcgctaagaaaatgctattggcccaaatcaaagccaactac
tcctcgggcgatgatatctcttcggatgaggaaacgcaggaggaagaatctgagtcggag
ggtgacgaggtcaaacaaggcaatgaagataatggaacagatgaaaatggggaagacttt
gcttcagaatcatctggcagtacgtatgatgggcccacctccaggcaccatcttctccgc
cacaaactaaccttagatgaaggaacatcaagtgacaaggctgtggcagagagtgaagta
ggaaagcaggagagcaagcaaagagccagcagcaaacacctgagttctgatagtgaaagt
gatggtgacagtaacgagtcagacctggaagatcttgggatgagcgaggagttgagtcag
tcagaggatgaggccggtgaagacagactcaaaagctccactaaagtgaaggaggcaccc
tgtagttacgaaaagaagaaacatgtgccctgcatttggctgtctgactccagcagtgaa
aagcagagtgataaagaagatcaagatgaggagatgagcgacagtaaaggcacccccaaa
ggacgcaaaaagatccgcaaaatcatggaagatatgaatctccgcgctgagacccaggaa
gccctcagagaggaggaggagagatgcaaacggttggcagatagggaacaacagatggag
gacaggagagagataactgttatagtggatgagctgtcccaaatggggtgtcccatcacc
accaagctggtcctggatcaggacgaggagaccaagaatcctcttgttcaggtgcacggg
agcttggtgacgagactgaagcctcaccaggtggacggtgttcagtttatttgggacagt
tgttgtgagtctgtgaagaaggccaactcttctcctggatcaggctgtatactggcacac
tgcatgggcctgggaaagactctgcagatggtaacattcctccacacggtgctgctgtca
gagaacctgaaattcagaacagcccttgtcgtgtgtccacttaacactatcctcaactgg
gtcaacgagttcaagaaatggcaagacaacatgggacaggataaagtacaagttacagaa
ctggcaacaataaagcatcttcccgaacgactcagagctctgcagagttggcagagagaa
ggaggtgttatgataatggggtatgagatgtaccgcatcctgtcgctagcccagaaaatc
aatgatgaggagaagaagaaagagttaaagagcatactggtaaatccaggtccagacttt
gtggtttgtgacgaggggcacatcctgcgcaatgaagcatccaatatcttcaaagctatg
aatgccatcaagacccaaagaagagtggtgctaactggaacaccactacaaaacaacctg
gaagagtaccactgcatggtcaatttcatcaagaagaatcttctgggctcactgggcgag
ttccgaaaccgctttattaaccccatacagaacggccagtgtgctgactccacaccaaaa
gacgtccgaatcatgaagaaacgagcacatgtacttcatgcaatgttggctggttgtgtg
cagagaagagattactcagagttgactcagtttctgcctcccaaacatgagtatgtgctg
gcagtgagagtttccccacttcagtatcagttgtaccgctactaccttgaccatttcact
ggtgtgggttccataactaacagagcaaaggttaggactggagcaaacctgttcaaggac
tttcaggtgcttggccgaatttggactcatccctggtgccttcaactcagctacattagc
aaagaaaacaagggacattttgaaaagacaaaacaagttaaagcggcagctctgctgaga
aatgaagaaaccactgttgctgagagatgtagtgggcccagagagaatgaagggaataat
gatgacagcagtgcagcggttattgttgatgtgtccaaaggcgctccagaagtggaagca
gagaaagcaaccatcagctcgaggtctcagagtctagatgaggactggttcaagaatcag
ctgtcagaaagggactccaaaatcctggagcactcagggaagatggtgctcttgtttgag
atcctcagaatggctgaagacctggacgagaaagtgcttgtgttcagtcagtccttgatc
tcattagacctaattgagaatttccttgaggcttctcaccatgccagggacacatcatca
ttcaaagcgggcagctggattaaaaatgttgattactatcgtcttgatggttccaccagt
gctgcgttacggaagaaatggacagatgtgttcaataatgctgccaatgttcgcggcaga
ttgtttctcatctcaacgaaggcgggttcacttggcatcaaccttgttgctgccaacagg
gtcatcatctttgatgcctcatggaatccctcatatgacgtacagagcatatacagggtg
taccgcttcggtcagctcaaacaagtgttcgtgtaccgcttcttggctcagggtaccatg
gaggagaagatctatgatcgtcaggtgaccaagcagtctttgtcctatcgagtggtggat
cagcaacagattgagaggcacttcaccctttttgaactgactgaactttacacatttgag
ccagacctgctggatgacccaaactctaagaaaagcaaaagaaccacctctgttgtgcca
aaggatacagtcctggcacagctattacaaacatgtaaagaccagatagtgtctttccac
gagcatgaatctctgctggaccataaacaagaggaggagctcagtgaggcagaacgcaaa
gctgcctgggccgagtatgaagccgagtcaaacacaaccaacctaccagtcaccttgagg
caggacaccttggatatgaagaccaatgaacagctattggaattgcttaacaagagccga
gcaaatgtatcggtggccttcctgtctctgcagaggatgaggtctcactctaatgaggac
tacatgttacgagtgctgcaacagtaccctctgctgcctgaggccgaggttaaggtcaaa
gctgagatttggaaactgtgtgatcagaaggaacaggaacgtagacgggccttttatcga
gacgttcttgcacagcaacaatcactcacactcagcattcaggccatattgaacaatcga
agaaatcaagggatgaagacgaccgtgaccactgtgaaccagcctggacagacttga
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integrated database retrieval system
