Siniperca chuatsi (mandarin fish): 122888679
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Entry
122888679 CDS
T08948
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122888679 (msx2b)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
122888679 (msx2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
LodA_C
Motif
Other DBs
NCBI-GeneID:
122888679
NCBI-ProteinID:
XP_044079343
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Position
LG14:17614638..17619782
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AA seq
282 aa
AA seq
DB search
MASRDTFNDLGCSSSEEDSNRADLTEGTAEEKTSPVVRRHHPFSVEALMSRRKTDGRGGE
STGCKPEGGSVAVSPAGLNSLYLCRETCSLPGGSRKSLTAAPSSPVKSEASEPEDCAPWV
TSCAFSTQPRHVSPSCPLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSS
LSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAADAKTAAVAAATAGGLHPGFTLPLSLG
TVSLYGQSYSAYHHHHHPRPILPISPLGLYAAPLGYSMYHLS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgggatactttcaacgacttggggtgcagttcgtctgaggaggacagtaac
cgtgcggacttgacagaagggaccgcggaagagaagacatctccggtggtgcgtcggcat
catccgttcagcgtggaggcgctcatgtccaggaggaagacggacggccgcggcggagag
tccacaggctgtaaaccggaggggggttcggtggcggtgtcccctgcaggtttaaactct
ctgtatctgtgtcgagagacgtgcagtcttcccgggggaagtcgaaagagcttaacggct
gcgccctcgtcgccggtaaaatccgaggcatcagagccagaggactgcgcaccctgggtc
accagctgcgcgttttctacacagcctcgtcatgtcagtccttcctgtccgttgaggaaa
cacaagaccaaccgaaagccccgcactcccttcaccacgtctcagctcctggccctggag
aggaagttcaggcagaagcagtacctgtccatcgccgagcgggccgaattctcctcctcc
ttgagcctgacagagacccaggtgaagatctggtttcaaaatcggcgggcaaaagccaag
aggctccaggaggctgagctggagaaactcaagatggccgctgacgccaagacggcagcg
gtggcggccgctaccgctggaggtttacaccctggctttactttgccgctgtcgcttggc
accgtgtcactgtacggacagtcatactctgcctatcaccaccaccaccaccccagaccc
atactgcccatttcacctttaggactgtacgctgctcctctgggctacagcatgtaccac
ttatcataa
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