KEGG   Siniperca chuatsi (mandarin fish): 122888747
Entry
122888747         CDS       T08948                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:schu03019]
    122888747 (zc3h12b)
Messenger RNA biogenesis [BR:schu03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     122888747 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 122888747
NCBI-ProteinID: XP_044079483
LinkDB
Position
LG14:9706392..9722877
AA seq 846 aa
MTVWSMVEKLKMEKRPLREENIDSSEAQHATDDSEDGSSSESESEEQQCHRVQVNSSRCK
KREPLVVTKPHRQLCRSPCLDRPSFSQSSTAQDFREDETSAGLGIKHASDREYQTKMEFA
LKLGYSGEQVETVLNKLGAAALINDVLAELVRLGNKVEPEIQPCSSTATSISRSPCVKET
VSPEVSVEDDSVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITV
FVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSD
GIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPV
VPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALAKC
GTGPATIKGDSNSEAKRVAPKRQSDPSIRSVACEPPEALSVIRKSETNSVPSLVSALSVP
TMQPAKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASVTYSEQF
PKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPNHCPESCLSHSNSD
SFSSYGDLYPSSVDSSLEESMKGQQQSPAQGRMQTFSHGFRHEALTRVQSYGPEEPKQGP
RKQSGSHLAPHIQHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYD
SNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIW
NSPWEMPSAVEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVT
KLRSCH
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgacagtatggtcgatggtggagaagctcaaaatggaaaaacgcccattgagggaggag
aacattgactcaagcgaggcccagcatgccactgacgattcagaggatggaagcagctca
gaaagcgaatcagaagagcagcaatgccacagggttcaggtgaacagcagtaggtgtaag
aagagggagcctttggttgtaacaaaaccccaccgacagctctgtcgctctccatgcctt
gaccggcccagtttttcccagagtagcactgcgcaagattttcgtgaggatgagaccagc
gcgggattagggatcaagcatgccagtgatagggagtaccagactaagatggaatttgcg
ttgaagttgggctattcgggagagcaggtggagacagtgctcaacaagttgggggctgct
gcacttattaacgatgttcttgctgagttagtaaggcttggaaacaaagtagagcctgaa
attcaaccttgcagcagtacggccacatcaatatcacggtccccatgtgttaaagagact
gttagtccagaggtgtcagtggaagatgactctgtggatacctatgataacctcaggccc
atcgttattgatggctcaaatgtggcaatgagccatggaaacaaagaggtattctcttgc
cgtggtatccaacttgctgttgaatggttcttggagaaaggacacaaagacatcactgtg
tttgtcccagcgtggagaaaggaacagtcgaggcctgatgccctcatcacagatcaagaa
atattacgcaagctggaaaaagaaaagatccttgttttcaccccatctcggagagttcaa
ggcaggagagtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattctgat
ggaattattgtgtcaaatgacaactacagagacttgcaaaatgagaagccagagtggaag
aagttcatagaagagcgtcttctaatgtactcatttgtcaatgacaagtttatgccgcct
gatgatccattgggaagacatggtccaagcttagaaaatttcctccgcaagcgtcctgtt
gttcccgagcacaaaaaacaaccttgcccctatgggaaaaagtgcacgtatggacataag
tgcaagtactatcatccagagcgtgtcaaccagccacagcggtcagtggctgatgaacta
cgggcctttgccaaattgtctgcagtgaagacgatgagtgaaggagctttagctaaatgc
ggtactggtccagcaactataaagggggacagcaactctgaggccaaacgtgtggcaccc
aaacgtcaatctgaccccagtattcgctctgtggcctgtgaacctccagaggcactgtcc
gttattaggaagtctgagacaaattcagtgccttcccttgtgtctgctctcagtgtgccc
accatgcagcctgccaagagccacgcagctggggccttgaacacacgatcagccagcagc
ccagtgccaggttctttgcagttcgcacacagttctctggagcacatgtctagtgtacag
taccctcctatattagttactaatagtcatggcgcctctgttacatacagtgaacagttc
ccaaagtatgactcagttagcgaccatggatattattcactgcacagtgatttttcaaat
atgagcatgagcagcatgcataatgtcgacagtttctgtagcatggagcacgagcatggt
gtgtatcagagaaatcccaaccactgccctgaatcctgcctcagccattcaaacagtgac
tcgttctcctcttatggggacctgtacccaagctctgtggacagtagcttagaggagagc
atgaaggggcagcagcagtctcctgcacagggtaggatgcaaactttctcccatgggttt
cgtcatgaagcactgactagggtacagagttatggaccagaggaacccaagcagggcccc
cgtaagcagtctggatctcatctagcaccacatatccagcatgttgctgtgggagcgagg
tccagctgtcctggagactatcccctaacgcagaatgtcctcccacctttatcctcacag
cccacgaggtctcttggtatgactcgtatggacagcatatcagattcaaggctatatgat
agcaacccaatgagacagaggcgacctccactgtgccgtgagcagcatgcaagctgggac
cctctgccttgtggtaatgagtcctatggatatcattcatatccactgagtaacagcctg
atgccgtgttgcgagcgggtgatggtccgcagcatgccagacaaaatggaacaaatctgg
aactcaccatgggagatgccatctgcagttgaacatcaagagcggtatgtcatcccagac
caccagtatcaaacatatcggaacctttgtaacatctttcctgcttacgtagtccactca
gtaatggagaagaaccctcatttgacagatccacaacaacttgcggctgtcattgttaca
aaactgaggtcatgccattga

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