Siniperca chuatsi (mandarin fish): 122888747
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Entry
122888747 CDS
T08948
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122888747 (zc3h12b)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122888747 (zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
122888747
NCBI-ProteinID:
XP_044079483
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Position
LG14:9706392..9722877
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AA seq
846 aa
AA seq
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MTVWSMVEKLKMEKRPLREENIDSSEAQHATDDSEDGSSSESESEEQQCHRVQVNSSRCK
KREPLVVTKPHRQLCRSPCLDRPSFSQSSTAQDFREDETSAGLGIKHASDREYQTKMEFA
LKLGYSGEQVETVLNKLGAAALINDVLAELVRLGNKVEPEIQPCSSTATSISRSPCVKET
VSPEVSVEDDSVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITV
FVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSD
GIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPV
VPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALAKC
GTGPATIKGDSNSEAKRVAPKRQSDPSIRSVACEPPEALSVIRKSETNSVPSLVSALSVP
TMQPAKSHAAGALNTRSASSPVPGSLQFAHSSLEHMSSVQYPPILVTNSHGASVTYSEQF
PKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHGVYQRNPNHCPESCLSHSNSD
SFSSYGDLYPSSVDSSLEESMKGQQQSPAQGRMQTFSHGFRHEALTRVQSYGPEEPKQGP
RKQSGSHLAPHIQHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYD
SNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIW
NSPWEMPSAVEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVT
KLRSCH
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatggtcgatggtggagaagctcaaaatggaaaaacgcccattgagggaggag
aacattgactcaagcgaggcccagcatgccactgacgattcagaggatggaagcagctca
gaaagcgaatcagaagagcagcaatgccacagggttcaggtgaacagcagtaggtgtaag
aagagggagcctttggttgtaacaaaaccccaccgacagctctgtcgctctccatgcctt
gaccggcccagtttttcccagagtagcactgcgcaagattttcgtgaggatgagaccagc
gcgggattagggatcaagcatgccagtgatagggagtaccagactaagatggaatttgcg
ttgaagttgggctattcgggagagcaggtggagacagtgctcaacaagttgggggctgct
gcacttattaacgatgttcttgctgagttagtaaggcttggaaacaaagtagagcctgaa
attcaaccttgcagcagtacggccacatcaatatcacggtccccatgtgttaaagagact
gttagtccagaggtgtcagtggaagatgactctgtggatacctatgataacctcaggccc
atcgttattgatggctcaaatgtggcaatgagccatggaaacaaagaggtattctcttgc
cgtggtatccaacttgctgttgaatggttcttggagaaaggacacaaagacatcactgtg
tttgtcccagcgtggagaaaggaacagtcgaggcctgatgccctcatcacagatcaagaa
atattacgcaagctggaaaaagaaaagatccttgttttcaccccatctcggagagttcaa
ggcaggagagtggtgtgctatgatgatcgcttcatagtgaagctggcttatgattctgat
ggaattattgtgtcaaatgacaactacagagacttgcaaaatgagaagccagagtggaag
aagttcatagaagagcgtcttctaatgtactcatttgtcaatgacaagtttatgccgcct
gatgatccattgggaagacatggtccaagcttagaaaatttcctccgcaagcgtcctgtt
gttcccgagcacaaaaaacaaccttgcccctatgggaaaaagtgcacgtatggacataag
tgcaagtactatcatccagagcgtgtcaaccagccacagcggtcagtggctgatgaacta
cgggcctttgccaaattgtctgcagtgaagacgatgagtgaaggagctttagctaaatgc
ggtactggtccagcaactataaagggggacagcaactctgaggccaaacgtgtggcaccc
aaacgtcaatctgaccccagtattcgctctgtggcctgtgaacctccagaggcactgtcc
gttattaggaagtctgagacaaattcagtgccttcccttgtgtctgctctcagtgtgccc
accatgcagcctgccaagagccacgcagctggggccttgaacacacgatcagccagcagc
ccagtgccaggttctttgcagttcgcacacagttctctggagcacatgtctagtgtacag
taccctcctatattagttactaatagtcatggcgcctctgttacatacagtgaacagttc
ccaaagtatgactcagttagcgaccatggatattattcactgcacagtgatttttcaaat
atgagcatgagcagcatgcataatgtcgacagtttctgtagcatggagcacgagcatggt
gtgtatcagagaaatcccaaccactgccctgaatcctgcctcagccattcaaacagtgac
tcgttctcctcttatggggacctgtacccaagctctgtggacagtagcttagaggagagc
atgaaggggcagcagcagtctcctgcacagggtaggatgcaaactttctcccatgggttt
cgtcatgaagcactgactagggtacagagttatggaccagaggaacccaagcagggcccc
cgtaagcagtctggatctcatctagcaccacatatccagcatgttgctgtgggagcgagg
tccagctgtcctggagactatcccctaacgcagaatgtcctcccacctttatcctcacag
cccacgaggtctcttggtatgactcgtatggacagcatatcagattcaaggctatatgat
agcaacccaatgagacagaggcgacctccactgtgccgtgagcagcatgcaagctgggac
cctctgccttgtggtaatgagtcctatggatatcattcatatccactgagtaacagcctg
atgccgtgttgcgagcgggtgatggtccgcagcatgccagacaaaatggaacaaatctgg
aactcaccatgggagatgccatctgcagttgaacatcaagagcggtatgtcatcccagac
caccagtatcaaacatatcggaacctttgtaacatctttcctgcttacgtagtccactca
gtaatggagaagaaccctcatttgacagatccacaacaacttgcggctgtcattgttaca
aaactgaggtcatgccattga
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