Siniperca chuatsi (mandarin fish): 122888780
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Entry
122888780 CDS
T08948
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
schu01006
]
122888780 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122888780 (chm)
Prenyltransferases [BR:
schu01006
]
Protein prenylation
Rab geranylgeranyltransferase
122888780 (chm)
Membrane trafficking [BR:
schu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122888780 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
122888780 (chm)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RAE1_2_domI_C
GDI
NAD_binding_8
CDC45
Motif
Other DBs
NCBI-GeneID:
122888780
NCBI-ProteinID:
XP_044079555
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Position
LG14:complement(29136014..29164452)
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AA seq
751 aa
AA seq
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MAAEDLPSEFDVVILGTGLAESVVAAAFSRVGQRVLHVDRRSYYAANWASFTFTGLLTWI
QQHHEESQPEEVQDWSSLLEEGEELIYLSNADSASISNVQVFCFTSEEDEEEEAQSADPP
NTTEEEAAGADEDAAKETSETESADSKEEEAKARAEQTADGEAGRQASQTEGEEPEADQP
TPSAAQSQSEPTKKKISYAQLVKEGRRFNVDLVSKLMYSRGSLVDLLIKSNVSRYAEFKN
VTRILTYRHGKVEQVPCSRADVFASRQLSVVEKRKLMRFLTSCVEETEEQLAYSGRPYLE
FLCDQQLGDNLQHFLLHSIAMVTEDTPTEEGLASTRHFLRCLGRYGNTPFLFPVYGLGEI
PQCFCRMCAVFGGLSENSHFLWYLQCRDKPTLTDPDWDRPQTRSRLGQTPDPVQTGTNSL
VSLISDIMSPPPSFRCKAVIDSRGQRITCSHFVVEDSYVGADRKRVATPTRFLSRAVLIT
DGSILPSNSDQQVSMVTVPPVAAGCPAVKMVELCPSTMTCMPGTYLVHLTCQSVGSAYED
LSPVVTRMFRTPESRDQEDCPSVLWCLYFNMADGSGLEVEGHDLPSNVYMCSGPDGGLGH
EHAIRQAESIFQKVLPEEDFCPPAPNPEDIIYDGDNTSSSAAEEEKQEEQDGAAEEEKQE
DGAAEEKQDGAAEEESRRSGSACRCLLLADSPNCTCGSVTSRKSSFQTDDRSAERQNLQE
RRLIRCKATWMNQNQNQNQNPAGLDPRLYRK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaggatctgccgtctgaatttgacgtcgtcattctgggcacaggtcttgct
gagtcggtggtggcagccgccttctccagagtgggacagagagttcttcacgtcgacagg
aggagttattacgcagccaactgggccagcttcaccttcaccggcctgctcacctggata
caacagcaccatgaggagtctcagccagaggaggttcaggattggtcgagccttttggag
gaaggggaggagctgatctacctgtcaaacgcagactccgcctccatcagtaacgtgcag
gtgttctgcttcaccagcgaggaagatgaggaggaggaagctcagagcgccgatcctcca
aacaccacagaagaagaagcagcgggagctgatgaagacgctgcgaaagagacttcggag
acagaatctgcagattcaaaagaagaagaagcgaaggcgagagcggagcagacggcagac
ggagaggcggggcggcaggcctcccagacagagggggaggagccagaggcagatcagcca
accccctctgctgctcagagccaatcagagccgaccaagaagaagatcagctacgctcag
ctggtgaaggagggacgccggttcaacgtcgacctggtctccaagctcatgtattctcgc
ggctcattggtcgatctgctcatcaaatcaaacgtcagtcgctatgcagagttcaagaac
gtcaccaggattctcacctatcgtcacggaaaggtggaacaggtgccctgcagcagagcg
gatgtgtttgcaagtcgtcagctgtctgtcgtagaaaagaggaagttgatgcgtttcctc
acttcctgtgtggaggagacggaggagcagctggcctacagcggtcggccatatttggag
ttcctgtgcgaccagcagcttggtgacaacctgcagcacttcctgcttcactccattgcc
atggtaacagaagacacgcccacagaggagggcctcgcctccacgcgtcactttctgcgc
tgcctgggtcgctacggcaacacgcccttcctgtttcctgtctacggcctcggagagata
ccccagtgcttctgtaggatgtgtgctgtgtttggaggactgtctgagaactctcacttc
ctgtggtacctacagtgcagagacaaaccaacactaactgacccagactgggacagaccc
cagacccggtccagactgggacagaccccagacccggtccagactgggacaaattcatta
gttagtctaatcagtgacatcatgtctcctcccccttcattcaggtgtaaggcggtgatt
gacagccgaggacagcgaatcacctgcagccattttgtggtggaggacagctacgtcggg
gcggaccggaagagggtggccacacccaccaggtttctctccagagctgttttgataact
gacggctccattctgcccagtaactcagaccagcaggtctccatggtaacggttcctcca
gtagcagcaggatgtccggcggtgaagatggtggagctgtgtccgtccacgatgacctgc
atgccgggaacatatttggtccacctcacctgtcagtcagtcggctccgcctacgaggac
ctgtcgccggtggttaccaggatgttccgcacgccagagtcacgtgaccaagaggactgt
ccgtctgtcctctggtgtctgtacttcaacatggccgacggttcggggctggaggtcgaa
ggtcacgacctcccgtctaacgtgtacatgtgctctggaccggatggaggtctgggacac
gaacacgccatcagacaggccgagtccatcttccagaaggttcttcctgaggaggacttc
tgtcctcctgctccgaaccccgaagacatcatctacgacggagacaacacctcgtcctcc
gcagcagaggaggagaaacaggaggagcaggatggagcagcagaggaggagaaacaggag
gatggagcagcagaggagaagcaggatggagcagcagaggaggagagccgccggtcaggc
tcagcgtgtcgctgcctcctgctggccgacagcccgaactgcacctgcggcagtgttact
tccagaaagtcctctttccagactgacgacagatcagctgagcgtcaaaatctgcaggaa
cgccgactcatccgatgcaaggccacgtggatgaaccagaaccagaaccagaaccagaac
cccgctggactggatcctcgtctctacagaaagtga
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