Siniperca chuatsi (mandarin fish): 122888801
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Entry
122888801 CDS
T08948
Symbol
myo1ca
Name
(RefSeq) unconventional myosin-Ic isoform X1
KO
K10356
myosin I
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122888801 (myo1ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122888801 (myo1ca)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122888801 (myo1ca)
03036 Chromosome and associated proteins [BR:
schu03036
]
122888801 (myo1ca)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122888801 (myo1ca)
04147 Exosome [BR:
schu04147
]
122888801 (myo1ca)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122888801 (myo1ca)
Membrane trafficking [BR:
schu04131
]
Endocytosis
Phagocytosis
Others
122888801 (myo1ca)
Others
Actin-binding proteins
Myosins
122888801 (myo1ca)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122888801 (myo1ca)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122888801 (myo1ca)
Exosome [BR:
schu04147
]
Exosomal proteins
Proteins found in most exosomes
122888801 (myo1ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
Zeta_toxin
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
122888801
NCBI-ProteinID:
XP_044079603
LinkDB
All DBs
Position
LG14:10310054..10324533
Genome browser
AA seq
1110 aa
AA seq
DB search
MQHSLEGRRRTHVVVDIYLTCQREDELKAKVDEKLQLRSLSDTGGGAPAWGGTTSSAFFQ
QQQDRMRYQGREVDVEGRVRLVMESVLTARDRVGVQDFVLLENYNSEAAFIENLRRRFKE
NLIYTYIGSVLVSVNPYKELEIYSKQQMERYRGVSFYEISPHIYAMSDNTYRAMRTERKD
QCILISGESGAGKTEASKKILLYYAVTCPTNDHMAALGDRLLQSNPVLEAFGNAKTLRND
NSSRFGKYVDVQFDFRGAPVGGHILNYLLEKSRVVHQNHGERNFHIFYQLLDGGDDDLLN
TLDLERNPQNYHYLVKGNCPKLSSVSDKNNWKVVMKALPVIGFTEEEVQKLLNIIAGVLH
LGNTQFGEGEEGETYITTETQINNLVKLLGVDGSALREALTHKKLTAKGEEMISPLNFEQ
AVSARDALAKAVYGRTFTWLVEKINQSLALKEEIYHSSKGSSVIGLLDIYGFEVLQHNSF
EQFCINYCNEKLQQLFIELTLRSEQEEYETEGIAWETVQYFDNKIICDLIEEKHKGIISI
LDEECLRPGETCDVSFLEKLEDTLGGHPHFVTHKLANGKTRRVMSREEFRLLHYAGEVNY
NVNGFLDKNNDLLNRNLKEVMCQSDNQILRHCFRREEVIDQKRPEMAATQFKNSLMKLME
ILMSKEPSYVRCIKPNDVKQPGRFDEVLVRHQVKYLGLMENLRVRRAGFAYRRRFEAFLQ
RYKPLCPETWPNWHGRLADGVSTLVNHLGYKAEEYKLGRSKIFIRFPKTLFTTEDALEAK
KPEIALTLQTSWRGYRERAKYQRIRHAVIVIQSGWRGMKARRRAKRRRQAAELIRRFIKG
FIYRHEEYCPENEYFLDHVRCSFLKNLRKNLPKSVLDKSWPTPPPSLVEASEHLWRLNMR
NMVMKYCRRVQPEWKKQMMQKVVASEIFKDQKDSYPQSVGRLFLDSRLEREQINLKVVQT
LGNDKVQYGVSVIKYDRRGFKPRPRQLLLTNTFAVLVDRTKIKQRIDYTALRGISVSSLS
DGMFVLYMPSEDNKQKGDVVLHCSHVIELVTKLAMMASKVNYVNISPGSIRFAVARGKEG
IIDFVRGSELKVAKGKRGHLLVTAPRINTT
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatagtttagagggaaggagaaggactcacgtagtggtggacatttacttgacc
tgtcaaagggaagatgaattgaaggcaaaggtggatgagaagttacagttgaggagtctg
tctgacacgggaggaggagcaccagcctggggggggaccaccagttcagctttcttccag
caacaacaggacaggatgaggtaccaaggcagggaggtggatgttgaaggaagagtgcgc
ctggtgatggagagtgtcctgactgcccgggacagggtcggggtgcaggactttgtcttg
ctggaaaattacaacagtgaggcagccttcatagagaacttacggagacgcttcaaagaa
aacctcatctatacatatattggctcagtgttggtgtcggtgaacccttacaaagagctg
gagatttactccaagcagcagatggaacgctacagaggggtcagcttctatgagatatcg
cctcacatctacgccatgtcagacaacacttaccgggccatgcggaccgagaggaaggac
cagtgtattctcatatcgggtgagagtggagcaggtaaaaccgaggcctccaagaaaatc
ctcctctactacgctgtcacctgccccactaatgatcacatggctgcccttggtgaccgc
ctactgcagtctaaccctgttctggaggcatttggcaatgccaaaacacttaggaatgac
aactccagccgctttggaaaatacgttgatgtccagtttgacttcaggggggcaccagtg
ggcggtcacatcctgaactacctgctggagaaatcacgtgtagtacaccagaaccacggt
gagaggaacttccacatcttctatcagcttctggatggaggggatgacgatctgcttaac
acactggacctggaaagaaaccctcagaactatcactatctggtcaagggcaactgtccc
aaactcagctccgtcagtgacaagaataattggaaagttgtaatgaaggccctgcctgtt
attggcttcacagaggaagaagtgcagaaattgctgaatatcatcgccggtgttctccat
ctgggaaacactcagtttggagaaggggaggaaggagaaacttatatcactactgagact
cagataaacaatcttgtgaagctgctgggtgttgatggctcagccctcagggaggcactc
actcacaagaaactcactgccaaaggagaggagatgatcagcccactaaattttgagcag
gcagtgtctgcccgtgatgccttagccaaggctgtgtatggtcggaccttcacttggttg
gtggagaagatcaaccagtcgctggctctgaaggaggaaatctaccacagcagtaagggc
tcctcagttatagggcttctagatatctatggctttgaggtcctacagcacaatagtttc
gagcagttctgcatcaactactgcaatgagaagctccagcagctgtttattgagctcacc
ctgagatctgagcaggaggagtatgagacagagggaattgcatgggagacggtgcaatac
tttgacaacaagatcatttgtgacctgatagaggagaagcacaaaggcatcatctctatt
ctggatgaggaatgtctgaggcctggagagacctgcgatgtctcctttttagagaaactg
gaagacacactgggcggccatccccattttgtcactcataagttggcaaatggaaaaact
cgcagggtaatgagtagggaggagttcaggctgctgcattatgctggagaggtaaactac
aatgtcaatggtttcctagacaaaaacaatgatttgctgaacaggaacctgaaagaggtc
atgtgccagtcagacaaccagatcctaaggcactgcttccgcagagaggaagtgatagac
cagaaacgcccagagatggctgccactcagtttaaaaacagcctgatgaagcttatggag
atcctcatgtctaaagagccgtcctacgtgcgctgtatcaaacctaatgatgtcaagcag
ccaggaaggtttgatgaagttctggtcagacaccaggtgaagtacctgggcctgatggaa
aacctgagggtcaggagagctggctttgcctatcgacgtcgctttgaagccttcctgcag
aggtataagcccctgtgtcctgagacgtggcccaattggcatggcagacttgcagatggg
gtctcaacactggtcaaccacctgggctacaaagcagaagagtacaaactgggcagatca
aaaatcttcatccgtttcccaaaaactctcttcaccactgaggatgcactagaagcaaaa
aagccagagatagctttgaccctgcagacatcatggagaggctacagggagagagccaag
taccagcgcatcagacacgcagtgatagtgatccagtctgggtggcgagggatgaaagca
cgcaggagggctaagaggcgtcgacaggctgctgagttaatacgcaggttcataaaaggc
ttcatctaccgtcatgaggaatactgccctgagaatgagtatttcctggatcatgtacgc
tgctccttcctcaagaatctacgtaaaaacctgcccaagagcgttttggacaaaagctgg
ccaacacctcctccgtccctggttgaggcctctgagcacctgtggaggctaaacatgaga
aacatggtcatgaagtattgcaggagggtccagcctgaatggaagaagcagatgatgcag
aaggtcgtagccagtgagatcttcaaggatcagaaagacagctaccctcagagtgttgga
aggctgtttttggactccaggctggaacgtgagcaaatcaatctcaaagtcgtccagacc
ctcggcaatgacaaagtgcagtacggtgtttcagtcataaagtatgacaggaggggtttc
aagcctcgccctcgccagctgctcctcactaacacctttgctgtgctggtggacaggaca
aagatcaaacagaggattgactatacagctctgagaggtatctctgtgagctctctcagt
gatgggatgtttgttctgtacatgcccagtgaggacaataagcagaagggcgacgtggtg
ctgcactgcagccatgtgattgagctggtgacaaaactagccatgatggccagcaaggtc
aactatgtcaacatcagcccgggcagtattaggtttgctgtggctcggggcaaggaggga
atcattgatttcgtcaggggttcagagctgaaggtggccaaaggcaagcgaggacatctg
ctagtgactgcccctcggatcaacaccacatga
DBGET
integrated database retrieval system
