Siniperca chuatsi (mandarin fish): 122888804
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Entry
122888804 CDS
T08948
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122888804 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
122888804 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122888804 (thoc2)
03041 Spliceosome [BR:
schu03041
]
122888804 (thoc2)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122888804 (thoc2)
Spliceosome [BR:
schu03041
]
Complex C
Other components
EJC/TREX
122888804 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122888804 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
122888804
NCBI-ProteinID:
XP_044079608
LinkDB
All DBs
Position
LG14:10357461..10384033
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKPDHGSEIRDIQAALYELCWQVVQGNLKL
DLVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEVIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPLDATIVEEHKRDISE
AKQIARKLVMVVLPSEKSEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPFFYATSHKAIALALCQLVHLTVEPLYRRAGLPKGAKGCVMHPLRNKRAPRPAESFE
DLRTDTFSMLGYLGPHLSHDPILLAKIVRLGKAFMKEYQSDGRPDVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDVLLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVMSLHPARVWDDLRPQFYATFWSLTMYDLAVPHAAYEREVNKL
KAQIKAIEENPEIPLNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKDQPARSATPANQQNGPG
STGKPATSTSKTEEGTSEDSDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKVTK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAVREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPVEPSRERDTIKESKSKEKGDRSAVAGSLKSPVPRSEPAE
LERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHVNYNSVARSKSREREMEKKDSDS
TQGRSKEKKEEKDRKDRKRDSAVNDRETSQESKRKKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKAESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKRHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacat
gagttcgtacaactctgcaaagaacttacagagaaaccagatcatggaagtgagattaga
gatatacaagccgccttatacgagctctgctggcaggttgtacagggtaacctgaagttg
gatcttgtcgccagcgtccttggggacatgatggaactccgggatgacatgccatcaatt
ttggcagatgtgttcagtatactagatttagagaccggtgcactggaagaaaaaaacaaa
cgtgaccattacacacaactggtgggagcgtgtttgttttttgttccagaggtcatcctg
aaagagaggctggatccagaaacccttgaatctcttggacttataaaacaagcccatcag
ttcaatcagaagattgtaaaaatcaagactaagcttttttacaagcaacagaagtttaac
ttgctaagggaggagaacgagggctacgccaagctaatcactgagcttggccaagacctc
tcaggcaacatcaccagccatcttgtcctggagagcatcaagtccctcataggatgtttc
aacttagaccctaatcgtgttttggacataatcctggaggtgtatgagagtcgatccgac
caagatgagttcttcctgtctctcatcaagtcctacatgtgtgagccactcaccctttgc
cacatcctgggctttaagttcaaattctaccaggagcccaacgaggaaacccccaagtca
ctctaccacattgctgctgctctgcttcaccataacctgatagagctggaagatctctac
gtacatcttatgccactagatgccaccatcgtagaggaacacaaacgagatatctcagag
gccaagcagatagctcgtaagctggtcatggttgtgttgccctcagagaaaagtgaagac
aaagaaaaggagaaagaaaaggaggaggagaagaatgagaagccacctgataaccagaag
cttggtctgctggaagcactacttagaattggagactggcaccacgcccagagcattatg
gaccagatgcctttcttctatgctacttctcacaaggccattgcgctggcactctgccag
cttgtgcacctgacagtggaacctctttacagaagggctggcctcccgaaaggggcaaag
ggatgtgtaatgcatccactgcggaacaagcgggccccacggcctgcagagagctttgag
gacctacgcacggacacattcagcatgcttggctacctgggccctcacctctcccatgac
cctatcctcctcgccaagattgtgcgtctgggcaaggccttcatgaaagagtaccaaagt
gatggcagacctgatgtcaaagacaaaatggaaacactattgagttgtttcctgagcatt
gcagaccaggtgctactcccttctctctctctgatggagtgtaatgcttgcatgtctgag
gaactgtggggtctgttcaaactctttccctaccagcacaggtatcggttatatggacaa
tggaagaatgagacatattccagccatccactgttggttaaagtcaaagcacagactgtg
gaaagagccaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaagctgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccaatggtacgacaacctcatcgttccagtggtggactccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcatcattgaggctctggccaatcccgagaaggag
aagatgaagcatgacgacaccaccatctcctcatggcttcagagcctggcaagtctgtgt
ggagccgtgttcagaaagtatccaattgagttggctggccttcttcagtatgtcaccaac
cagctaaaagcagggaagagttttgacttgttgatcctgaaagaggtggtgcagaaaatg
gctggcattgagatcacagacgagatgacctcagagcagttagaggccatgaccggaggg
gagcaactcaaagctgagggtggctactttggccagatcaggaacactaagaagtcatca
caacgtctgaaggatgtgctgctggaccacgaattggccttgccactgtgtctgctcatg
gcccagcaacgaaatggtgtggttttcttagagggtggagagaaacacctcaaacttgtt
ggccacctctatgaccagtgtcatgacacgttggtgcagtttggtggctttctggcctcc
aacctaagcacagaggactacatcaagcgggttccctccattgacatcctttgtaaccag
ttccacaccccacatgatgctgccttcttcctgtctcggccaatgtatgcccatcagatt
ttgtctaagtacgatgagttgaagaaagcagagaaaggcaaccggcagcagcagaaggta
cacaagtatgtggcagcctgtgaacaggtaatgacaccggtgcacgaggctgtgatgtct
ctccatccggccagagtctgggacgacctccgccctcagttctatgccacattctggtcc
ctcacaatgtacgacctggccgttccacatgctgcctatgagcgtgaggtcaacaaactc
aaggcccagatcaaggccatcgaggagaacccggagatacccttgaataagaaaaaaaag
gagaaggaacgctgcactgctctgcaggaaaaactgcaggaggaggagaagaagcagctg
gagcacgtccaaagggttctacaccgtctcaaactggagaaagacaactggttgttggcc
aaatccacaaagaacgagaccataacaaagttcctgcagctctgtctgtttcctcgctgc
atcttctcttccattgacgctgtgtactgtgcccgctttgtcgagctggtccatcagcag
aagacgcccaacttctgcaccctcctgtgctatgatagggtattctctgctatcatttac
actgtggccagctgtacagagaacgagtctcaccgctacggacgcttcctctgctgcatg
ctggagacagtgacccgctggcacagtgaccgtgcaatctatgagaaggagtgcgtcaat
taccctggcttcctgaccatcttcagagccacaggcttcgatggagggaacaaagcagat
cagctagattatgagaacttcaggcacgtggtgcacaaatggcactacatgctgactaaa
gcttcagttcactgcctggagacgggagattacacccacatccggaatatcctcattgtg
cttaccaagatcctgccctgctaccccaaggtcctgaacctgggccaagcgctggagtgc
cgtgtccacaagatctgcctcgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggttcacatggtccctgagaatgagttt
caccacaaggaccagccagcacgcagtgccacacctgccaatcaacagaacggccccggc
agcacaggcaagcctgccaccagcacaagcaagacagaggaggggacgtcagaggatagc
gatcggggcaaagataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaacggtgctctcaacagcaccaaagtcactaaa
gaacgtgatgacaaagagaagagcgggaaggagaaaaaggagaaaaaggaaaagacacca
ggcagcactccggagacaaaggcggagaatcgtcgggagaagcagagagacgagagagcg
gggaaggaggagcgggcggtacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaggctgaggagaagagcagcaaagacgacaaggccaaagccggcaacggggag
cctgtggagccgtccagggagcgtgacaccatcaaggagtcgaagagcaaggagaaagga
gacaggagtgctgtggccgggtccctcaagtcaccagttcccagatcggagccagccgaa
cttgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcttcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgtcaactac
aattcagtagcccggtccaagagcagagagagggagatggagaagaaagattcagacagc
acacaaggccgatccaaagagaagaaggaagaaaaggatcggaaagacaggaaaagagac
agtgctgttaatgaccgtgagacgagccaagaatccaagcgtaaaaaggatgagaatgga
accaattcctccaaaaacagcaagagcacaagtccttcctgtgactccccgctttcagct
gaaaaagagaagagcaaaagatccaaatcgtccagtaaagagaaggccgagtctgtgaaa
cctgagcgaacgtcctctggaggcaaaaaggagtctagacatgataaagagaaatctgaa
aagaaagagaagagggacagcagcggaggaaaggaagagaaaaggcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system