Siniperca chuatsi (mandarin fish): 122888820
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Entry
122888820 CDS
T08948
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122888820
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122888820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122888820
NCBI-ProteinID:
XP_044079646
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All DBs
Position
LG14:10601017..10608300
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AA seq
1039 aa
AA seq
DB search
MENLTPEQWREIMNKKMQFPPGLISAIQEGKIELLCGLLKTGDGIIRQLDESEDRQWREA
LNLAIRLGSEDSMDALLRGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHVIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLRAFSLSRELRKLSQKEPEFKPQYL
GLEQLCQDFAVELLGMCRNQSEVTTILNSCGDESQDYLEQQAFEEGIPNLSRLRLAVNYN
QKEFVAHPICQQVLSSIWCGKLAGWRGSKTAWKLFVSVGIFLTMPLLCLVYWLAPKSKVG
KILKIPVIKFLLHSASYLWFLITLLGESITMEMYRDKFASRQQNLLHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVVVLSMYLASFALRVLIVLKGYFLCHDHNGVDECVYF
TQTVREDWHQEDPQLISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPQLGRFNETFRFLFWTMFGVVNQDYVDMPQFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYILRGIFRRIFCCCTCNSEKKYPPVASVTNGKGSEDSQLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITELSKAVYRMHNNMKVVQQLQVDDGHIGSHALTKD
NSSILGKYITGAKNNFRGFNSRQDDKDTSLKVTLHNEEEEVHKEKVDSDTKQESKSDAQL
NQVGECGAEGSKQVTDCDVVKMEEGRAKAELGDKKESENKKQVEADKKENTDTEVKEKVV
AGTSFNNVEEKVKAKATQKEAEKRREGQILTGTKAGEKHTETTPEQAKSIKVSNEKTDTK
RVVNKFKDIELQEKTVEARWMKGRKFEDNVAEKPCVRVSNEERGAKKMIPSPTGSSSSQD
TGFGSQEGEGSIDGMLVRL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagattatgaacaagaagatgcagttccct
ccggggctcatcagtgccattcaggaagggaaaatagagctgctgtgtggactgttgaag
acaggtgatggcatcatccgccagctggatgagtctgaggatcgccagtggagggaggcc
ctcaacctggccatccgcctgggcagcgaggacagcatggacgccctcctgcggggggtc
aagtttgacttccggcagattcacgaggccctgctagtcgctgtggacaccaaccagccc
agagtggtgaagcgtctgctggaccgcctggaccaggagaaaggcaacaagatggacgtg
cgctccttctctcaggccatctttgaccactctattgacaactcacagtttgcccctggt
gtgactcctctgaccttagcctgccagaaagacctgtatgatatagtcaccatgctcacc
caaaaaggtcacgtcatcccatggccacataagatatcctgtgcctgtctggagtgtcgt
aacggccggcaatacgacctgctgaagttctccttgtctcgtatcaacacctaccgtggc
atcgccagccgtgcctacctgtccatcacctctgaggatgccatgctcagagctttcagt
ctcagcagagagctccgcaagctctcacaaaaagagccagagttcaagcctcagtacctg
ggcctggagcagctttgtcaggattttgccgttgagttgctgggcatgtgtcgcaaccag
agcgaggtgaccactatcctgaacagctgtggagacgagagccaggattacttagagcag
caggcctttgaggagggaatacccaacctgtctcgtctgaggcttgctgtcaactacaac
cagaaggagtttgtggcccacccaatctgccagcaggtgctgtcatctatctggtgtggg
aagctggcaggctggagaggcagcaagacggcctggaagctgtttgtctctgtggggatc
tttctcaccatgcccctcctctgcctcgtctactggctcgcacccaagtcaaaggtagga
aagatactgaagatccctgtgatcaagtttctcctccactcagcctcctatctgtggttt
ctcatcacgttacttggagaatcaataacaatggagatgtatcgagacaaatttgcttcc
cggcagcagaacctcctgcacagctccttccacatggtgtgggtggtcggattcttctgg
tatgagtgcaaggaggtgtggatcgaggggctgcggagttacttcctggactggtggaac
tgcttggacgtggtggtgctcagcatgtacctggcgtcctttgcgttacgtgtgcttatc
gtgctcaaaggttacttcctctgccatgatcataacggcgtggatgagtgcgtctacttc
actcagactgtgcgtgaggactggcatcaggaggacccccagctgatttcggaggtgctg
tttgcagtgaccagcatgttgagcttcacgcggctggcgtacatcctgccagcccatgag
tctctgggaactctgcagatctccatagggaagatgattgatgatatgatgagatttatg
ttcatattgatgatcattggaacagccttcctctgtggcatcaacaatgtctatgttcca
tatgtcatctctccacagcttggcaggtttaatgagacgttccgcttcttattctggacc
atgtttggcgtggtcaaccaggactacgtggacatgccacagtttgtgttggcagagttt
gtaggaaggattctgtatggcatcttcacgctcgtcatcgtcatcgtcctgctcaacatg
cttattgctatgatcaccaactcctttcagaaaattgaggatgatgcagatgttgagtgg
aaatttgccaggtcaaagctgtacctcagttacttcagagagggcctcaccatgcctgtg
cccttcaacatcatcccctcaccaaaagctgtcttttacatcttaaggggtatctttaga
cgaatcttctgctgctgcacttgtaattctgagaaaaaatatccccctgtagcctctgtg
accaatggtaagggatctgaagacagccagttaccttaccggcagcaggtgatcagagct
ctggtgcaacgctacattgagtcagctcgcagggagttcgaggagaccaagaggaaagat
atcggtaataggatcacggagctgagcaaagcggtctacaggatgcacaataatatgaaa
gtggtccagcagcttcaggtggatgatggacacattggaagccatgcattgaccaaggat
aactcctccatactggggaaatacatcactggtgccaagaacaatttcagaggttttaac
agcagacaagatgacaaagatacatcacttaaagtgacactgcacaatgaagaggaagag
gttcataaagaaaaggttgactcagatacaaaacaggagtcaaagtcagacgcacaactg
aatcaggtgggcgaatgtggagcagagggatcaaagcaggtaacagactgtgatgtggtg
aaaatggaggaaggcagagctaaagcagagctgggagataagaaggaaagtgagaataaa
aagcaggtggaagcagacaaaaaagaaaacaccgacactgaagtgaaagagaaggtggtg
gcagggacaagttttaataatgtagaagaaaaggtaaaagccaaggccacacagaaggag
gcagaaaaaagaagggaagggcagatacttacaggaacgaaggcgggtgaaaaacacaca
gagacgacccccgaacaagctaaaagcatcaaagtcagtaatgaaaagacagacacaaag
agagtagtaaacaagttcaaagacatagagctgcaagaaaaaacagtggaggcaagatgg
atgaagggtagaaagtttgaggataatgtagcagagaagccttgtgtcagggtgagcaat
gaagaacgcggagccaagaaaatgattccctcgccaacaggcagcagcagctcccaggac
acgggttttggttcccaagaaggggagggatcgattgatgggatgctagtgagactgtaa
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