Siniperca chuatsi (mandarin fish): 122888834
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Entry
122888834 CDS
T08948
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122888834 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122888834 (chrne)
Ion channels [BR:
schu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
122888834 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
122888834
NCBI-ProteinID:
XP_044079682
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Position
LG14:10768395..10777133
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AA seq
518 aa
AA seq
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MMAAHSFWIFFGVVTVLGTSMVQVQCNEESHLIGDLFRGYNKNIRPVVHPEDKVEVQIKL
TLTNLISLNEKEETLTSNVWIEIQWTDYRLAWNTSKYYGIDVIRVPCNTVWLPDIVLENN
IDGKFDVAYYANVLISSSGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSANE
VELILAVGETGNTIEWVDIDPEAFTENGEWAIVHRPARKMINARYSPDDLEYQEITFNLI
IQRKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKIP
ETSLSVPLIGKYLIFVMCVTTLIATNQIVVLNFSLRSPNTHTMSHTIKHVFLEMVPRFLG
MSPLVDDSEVTTEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVD
NIDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTRQQNSIGSEIENWVLIGKMIDKVCF
WAAILLFIIGTVGIFLTGHFNQAPEFPFPGQSKKYVPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcgcacagtttttggatattttttggagttgtaactgttctcgggacttca
atggttcaggtgcagtgtaatgaggagtcgcatctgatcggcgacttgttcagaggctac
aacaagaatattcgcccagtggttcatcccgaagacaaggtggaggttcagatcaagctg
accctcactaaccttatctctctgaatgaaaaggaggagactctgacgagcaatgtgtgg
attgagattcaatggactgattatcgccttgcctggaacacatctaaatattatggcatt
gatgttattcgtgtcccatgcaacactgtttggcttcctgacattgtccttgagaacaac
atcgatggaaagtttgatgtggcttactatgccaatgtgttgatcagcagcagtggttgg
atgtattggctgcctcctgctatctaccgcagcacttgtgccattgagatcacctacttc
ccatttgattatcaaaactgcacgctagcattcagatcccagacgtacagtgccaatgaa
gtggagctcatcttggctgttggagaaacaggcaacactatagagtgggtggacatcgac
cccgaggctttcacagagaatggcgagtgggccatcgtccatcgtccagccaggaagatg
atcaacgcacggtattccccagatgacctagagtatcaggagatcacgttcaatctgatt
atccaaaggaagcccctcttctacatcatcaacatcatcttgccctgctccctcatctcc
tcattggtggtactggcctacttcctacctgcacaagctgggggacaaaagttgactgta
tccatctctgtcttgctggctcagactgtcttcctctttcttattgctcagaagatccct
gagacgtctctctctgtccctctcatcggcaagtacctgatctttgttatgtgtgtcact
actctcattgctactaatcaaattgtggtgctgaacttctccctgcgtagccccaacact
cataccatgtcccataccatcaaacatgtgttcctggaaatggtacctcgcttcctaggc
atgtccccactggttgatgacagtgaggtgacaacagaggtaaacggagtgagggagcgg
cggcgcagctcctttggcctcatgcagagagctgaggaatacgtactgaaacaacctcgc
agtgaaatgatgtttgacaaacaaagagagaggcatggtctcacacgatcgattgtggat
aatatagatgtcagcagcacagccaatctgtataagagtttggcccaagctgcacctgag
atcaagcaatgtgtggatgcctgcaatttcattgctgagagtacaagacaacaaaatagc
attggatctgaaattgaaaactgggtactgattgggaagatgattgacaaggtgtgtttc
tgggctgccattctcctcttcatcatcggcacagtggggatcttcttaacaggacacttc
aaccaggcacctgaatttccatttcctgggcagagcaaaaaatatgtcccgagttaa
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