Siniperca chuatsi (mandarin fish): 122888852
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Entry
122888852 CDS
T08948
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122888852 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122888852 (taf6)
03036 Chromosome and associated proteins [BR:
schu03036
]
122888852 (taf6)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122888852 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
122888852 (taf6)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122888852 (taf6)
STAGA complex
122888852 (taf6)
TFTC complex
122888852 (taf6)
SAGA complex
122888852 (taf6)
SLIK complex
122888852 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
Bromo_TP
CBFD_NFYB_HMF
DUF4236
Motif
Other DBs
NCBI-GeneID:
122888852
NCBI-ProteinID:
XP_044079724
LinkDB
All DBs
Position
LG14:complement(10970740..10976715)
Genome browser
AA seq
647 aa
AA seq
DB search
MAEERRQKQCSVVLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGVQPAIPENPPPAPKEQQKVESTEPLKVAKPGQEEEGTIQG
KGQGATAADGKGKDKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRADKKETRNY
IEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEK
YLHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTF
TKSWLDDKTQWTTRYGCIAGLAELGPDVIKTLILPRLSVEGARIKAVMEGPVVSNIDKIG
ADHVQSLLLKHCASVIAKIRPQPDNVEQYRTDYGYLGPMLCSHVMKARTQAALQAQQVNR
TTLTITQPRPTLTVSQSGLSGSAGPRTPSIIKVPSSLTLMSPRPGTPSQPSPPATKYIVM
TTSAGAASTQQVITLSSSQSASSVTSTVPSATSTLQPLVKLESGSGPGLTSSRPMQKYIV
VSLPSSASSSLETKSSVLTTSISSTPLEAGMKLDRSESPGASTQSPH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacgtcggcagaagcagtgttcagtcgtcctgcccacagagtccatgaag
gccatggcagagtctgtgggagtggggcagttacaggaggaaagctgcgtagccctaagt
gaagaagtcagctacagaataaaagaaattgcacaggatgctctcaaattcatgcatcat
gggaagagacgtaaattaaccaccagtgacatagataatgctctcaaactaaaaaatgtg
gagccactgtatgggttccaatcgcaagagtttatcccatttcgctttgcaagtggtggt
ggaagagagcttcatttctatgaggaaaaggaagttgacctcagtgacattatcaataca
ccgctccccagagttccactagatgtgtctctcaaagcccactggttaagtattgagggg
gtgcagccggctattccagaaaatccaccaccagcaccaaaagagcaacaaaaggttgaa
tctacagagcccctcaaagttgccaaacctggtcaggaggaggaaggtacgattcaaggc
aagggtcagggggcaacagctgctgatggcaaaggcaaggataagggtctaataaggttg
aagccacgcagcactcatgagttgtctgtggaacagcagctctactacaaggaaatcaca
gaagcgtgtgttggctcctgtgaagctaagagagctgacaagaaagaaacaagaaattac
atagaagctttacagagtattgctacagatcctggactgtatcagatgcttccaagattc
agcacatttatttctgaaggagttcgtgtaaatgtggtgcaaaacaacttggctctactg
atttatttaatgcggatggtcaaagctctaatggacaaccccaccctgtatttggagaaa
tacctgcatgagctcatcccagctgtggtgacatgtattgtgagtaagcagctatgtttg
cgaccagatgttgacaaccactgggctttacgagactttgctgctcgcctcatggcccaa
agttgtaaaacgttcagtactacaaccaacaacatccagtctcgtattaccaagactttt
actaagagttggttggatgacaaaacccagtggacgactcgttacggctgcatcgctgga
cttgctgaactaggacctgatgtgattaagacgttgatccttcctcggctttctgtagag
ggtgctcgcatcaaagcagtgatggaaggaccagtggtctccaatattgataagatagga
gctgaccatgttcaaagcctcttactgaaacactgtgcaagtgttattgccaagatacga
cctcagcctgacaacgtggagcagtatcggacagactatggttacctcggacccatgctt
tgctcccatgtaatgaaggccaggactcaagcagcactgcaagctcaacaagtcaacaga
accacattaacaatcacccagcctcgtccaacccttacagtctcacaaagtgggttaagt
gggtcggcaggacctcgcactcccagcatcattaaagttccaagctccctcaccctgatg
tcccctcgaccagggaccccatcacagccatctcccccggcaacaaagtacatcgtcatg
acaaccagtgcaggagctgcctccactcagcaggtaatcaccctcagctcttcccagtcc
gcctcatcagtcactagcactgttcccagcgccacttcgaccttgcagcctttggtaaaa
ctggagtctggcagtggccctggactgacaagttcacgacctatgcagaagtacatagtg
gtatctctgccctcgtctgcctcttcctctttggagactaagagctctgtgctaacaacc
tcaatttcctcaaccccactagaagcagggatgaagctagaccggtctgagtctcctgga
gcgagcacacagtcgccacactaa
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integrated database retrieval system
