Siniperca chuatsi (mandarin fish): 122888874
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Entry
122888874 CDS
T08948
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03030
DNA replication
schu03410
Base excision repair
schu03420
Nucleotide excision repair
schu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122888874 (rfc3)
03410 Base excision repair
122888874 (rfc3)
03420 Nucleotide excision repair
122888874 (rfc3)
03430 Mismatch repair
122888874 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122888874 (rfc3)
03036 Chromosome and associated proteins [BR:
schu03036
]
122888874 (rfc3)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122888874 (rfc3)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122888874 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
122888874 (rfc3)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122888874 (rfc3)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122888874 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
122888874 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
DUF1409
AAA_5
Motif
Other DBs
NCBI-GeneID:
122888874
NCBI-ProteinID:
XP_044079798
LinkDB
All DBs
Position
LG14:15297825..15301011
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSFGKLDYHKEQAAQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINIIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSNTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSAEEVCNVLTSVCKKEGLLLPPELAKQIAEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPQTDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDVIMKGLVTELL
SNCDGQLKTEVAHMAAYYEHRLQLGNKAIYHLEAFTAKFMAIYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatatcgaccgacttccttcgggaaactcgactatcacaaa
gagcaagcggctcagctgaaaaacttggttcaatgtggcgacttcccacacttgctggtg
tacggtccatcaggcgcggggaagaagacccgcatcatgtgtctgctgagggagctgtat
ggagctggggtggagaagcttcgcatagagcaccagaccatcgtggctccctcaaaaaag
aaaattgagattaacataatagccagcaactaccacttggaagtcaacccaagtgatgct
ggaaaccaggaccgtgtggtgattcaagagctgattaaaactgtggctcagtctcagcag
atccagtcgaacacccagagagagttcaaagtggtgttgctaacagaggtggacagactc
acaaaggatgcccagcatgctttgcgccggacaatggaaaagtacatgtccacctgccgt
cttatcctctgctcgacatccacctccaaagtcattgggccaattcggagccgttgtctg
gctatcagagttcctctgccgagcgcagaagaggtctgtaatgttctgacatcagtctgt
aaaaaggagggtctactcctcccacctgagctggccaagcaaatcgctgagaagtctggt
cgcaaccttcgcaaagcccttttgatgtgtgaggcctgcagagtgcagcagtatccattc
tcagtggaccaagacgtcccacagacggactgggaggtctacctcagagaaacagctaat
gccatcgtcagccagcagagccctcagagattgttggaggttcgagcaaggctgtacgag
ctgctgactcactgcatccctcctgatgtcattatgaagggtctggtaacagagttgttg
agtaactgcgatggccagctgaagacagaggtggcccacatggcggcctactatgaacac
agactgcagctgggcaacaaagctatctaccaccttgaggccttcactgccaagttcatg
gccatctacaagaagttcatggaagacggtctggatgccatgatgttttga
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