Siniperca chuatsi (mandarin fish): 122888978
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Entry
122888978 CDS
T08948
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122888978 (msh4)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
122888978 (msh4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
122888978
NCBI-ProteinID:
XP_044079861
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Position
LG15:complement(13974784..13982104)
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AA seq
920 aa
AA seq
DB search
MFRSSTEEVTTGSDTSECGQTWGVSPMDRSGLNETTSYGPASASSGSSHQSLDKGSTSSS
HSPGTTGQFHHSFRLGRTNSSLLASTSDSSPLRGHRGTPSLRRTLGSHPARTPLTDPTAT
SCSSATTTSGASVIVVVVEGRGLARGEIGMASLNLKCPELVLSQFADTGTYAKVITKIHI
LVPLEILMPDTASEKGKGTKLFSLITENFPGVAFTAIQRKYFNERKGLEYIQQLCAPEFG
TVLMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVSFKGSEQTAMIDSASASNLELV
VNNRVHRSEHSLLGVLNRTKTPGGARRLRSNILEPLVDVDTINIRLDTIQELLQDEELFY
GLKNAIGHFLDIDQLLSVLVQIPKQETVQVAEAKITHVIQLKHTLDLVPRLRMVLKNCNT
ALLKAYSTSLEDNRFDMILEQIKTVINDDTTYLKGSLNMRTQKCYAVRPNINEFLDIARR
AYTEIVDDIAGLVNQMGGKYGLPMRTSFSTVRGFFIQMKLEGVVLPEGKLPPEFIKVTKH
KNNYGFTTADLMKMNDRCDEALREIFHMSYVVICQLLSTIHEHIHCLYKLSDAVSMLDML
LSLANACTISDYVRPEFTDTLAIKQGRHPILERMAGQQPVSNNSYISEGSNFVIITGPNM
SGKSTYLKQVALCQIMAQIGSFVPAEYASFRVADQIFTRIGVDDDFETNSSTFMLEMKEI
SYIIHNVSDRSLIIIDELGRGTSAEEGIGICHSVCEFLLSLKAFTLFATHFLELCQLESL
YPNVENQHMEVQHTRTGDTGAESVVYTYLLNRGCSEERHYGLRAAEMTALPSNIIQEAKT
IASKVRKQLLAKHHSDPETQRQRAVYHLATRLLQTARNSRLDPDSLRMYLKGLKKQYEAE
LQTAGQQASTGTGGMTDSAV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcagcagcaccgaggaggtaacaaccggcagtgacacctcagaatgtggacaa
acctggggggtgtccccaatggacagaagcggactgaatgaaactacctcgtacggtccc
gcatcagcttcctccggttcatcccaccaaagtttagataaaggcagtaccagctccagc
catagcccaggaacgacaggtcagttccatcacagcttcaggttaggcaggacaaattca
tcactccttgcatctacctcggacagctcccccctccgcggccatagaggaacaccgagt
ctcaggaggaccctggggtcacaccctgcacggacaccactgactgatcccaccgcaaca
agttgctcctctgcgaccacaacctctggtgcctcagtgattgtggtagtggttgaaggg
cgcggtttggccaggggagagattggcatggccagtctcaacttgaaatgtccagagcta
gttctctctcagtttgcagacactgggacgtatgccaaggtcataaccaagattcacatc
ttggtgccactggaaatactgatgccagacacagccagcgagaaggggaaagggacaaag
ctgttcagcctcatcacagagaacttcccgggagtagctttcactgctatccaaaggaag
tattttaatgagaggaaagggctggagtacattcagcagctgtgtgctccagaatttggc
accgtcctcatggaagtgcaagctaagtattattgcctggcagcagcagctgctttgctg
aaatatttagagttcatccagaactctgtctacgctgccaagtctctcaaagtgagcttt
aaagggagtgaacagacggcaatgattgactcagcatctgcctctaacttggagttagtg
gtcaataatagagtccacaggagcgaacatagtcttttaggggtacttaaccgcactaaa
acacctggtggtgctagaaggttgcgctccaatattctggagcctctggttgatgtggac
accatcaacatacgcttggacaccatacaagagcttctgcaggatgaggagctcttctat
ggcttgaagaatgccataggtcatttccttgacattgaccagctgctctctgttcttgtc
caaatcccaaagcaggaaacagttcaggttgctgaagcaaaaattacacatgtcattcag
ctgaaacacacattggatctggtgccacggttaaggatggtgttgaagaactgcaacaca
gctctgcttaaggcatacagcacctcactggaagacaacaggtttgacatgatcctagag
cagatcaagacagtgattaatgatgacactacctacctgaaggggagcctgaacatgcgc
acccagaagtgttatgctgtccgccccaacatcaatgagttccttgacattgctcgcaga
gcttacactgagatagtggacgacattgctgggctagtgaaccagatgggggggaaatat
ggtttgccaatgcgtaccagcttcagcacagttcgaggtttcttcatccagatgaagctt
gaaggagttgtcttgcctgaagggaaactccccccagaatttatcaaggtaaccaagcac
aagaacaactatggcttcactactgcggacctgatgaagatgaatgaccgctgtgatgag
gccctgagggagatctttcacatgtcatatgtggtgatatgtcaactgctgagcactatc
cacgagcacattcactgcctctacaagctctctgatgctgtatccatgctggacatgttg
ctgtccctagccaatgcatgcaccatctcagactatgtgcgtccagagttcacagacaca
ctggccatcaagcagggtcgtcaccccattctggagcgaatggctggacagcagcctgta
tcgaacaatagctacatctctgagggcagcaactttgtcatcatcactggacccaacatg
agcggcaaatccacctacctcaaacaggtggcgctgtgtcagatcatggctcagattggc
tcttttgtccctgctgagtatgcgtcttttcgtgttgctgaccagattttcaccagaatt
ggtgtagatgacgattttgaaactaactcttccaccttcatgttggaaatgaaggagatc
tcttacataatccacaatgtaagtgacaggtccctgatcatcatagacgagttggggcgc
ggtaccagtgctgaggagggcatcggcatctgtcactcagtttgtgagttcctccttagc
ctcaaggcgtttaccctgtttgccacacactttcttgagctgtgccagctagagtctctt
tatcccaacgtggagaaccagcacatggaggttcagcacacacgcactggtgacactggt
gctgagagtgtggtgtatacatacttgctgaatcgtggatgctctgaagaaagacactat
ggtctgagagcagcagaaatgactgcacttccttcaaacataatccaagaggcaaagaca
attgcctccaaagttaggaagcagcttttggccaaacatcacagtgatccggaaacacag
aggcagagagctgtgtaccacctggccacccgcctcctgcagactgccaggaattccaga
ctggacccagacagcttgcgtatgtatctaaagggcctgaagaagcagtatgaggcagag
ctgcagacagcagggcagcaggcatccactggcacaggaggaatgactgactcagccgta
tag
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