Siniperca chuatsi (mandarin fish): 122888988
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Entry
122888988 CDS
T08948
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122888988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122888988
03021 Transcription machinery [BR:
schu03021
]
122888988
03036 Chromosome and associated proteins [BR:
schu03036
]
122888988
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
ARID
122888988
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122888988
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122888988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
122888988
NCBI-ProteinID:
XP_044079875
LinkDB
All DBs
Position
LG15:11508102..11685141
Genome browser
AA seq
2383 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSSGLGPELNSGKSGGGGGGGTIQRTGPMLGAGDGTLNNVDH
HRRNELSMVHSTSTTHNAPDGHDKDGNNLTSAPASTNSTTSSMETGLIANHKLKCVGSGD
PPQSLPPPQQQPPPQFGQFTPHQQRQIQSNNTANNNGQGPRGDRGMDHQHHGGKENLLGS
QGEPQQQHMPGKGEVDLTCKPAERMMGTRYEHSNLGPTSNNSEFNNNYYTPRPCYEQHGG
QQQQSTGMGITHSSAHNSMENSHEAGYHNSQYNQYPAYRAGYSGGAYGMMGPSGCRQPGN
MMMGSNSSASHGKSPLGATSGGFQRFPGQTQQQHPSGATPTLNQLLTSPSPMMRGYGGAY
QDYSGSTAQQQAGMGLGKDVGPQYGATSAHGWGGQQRNHPHLMSPGNGGQGLGRPQVSSM
DFMAMKRSQLYSMANNPYSTPQQPGGGPYPPSQTYTSPPPHRYPMSMQGRGQMSMGGMQY
PQQQQVAPYGQQGMGGYSQQQQVGQQGTPPYFSPPQQTPPGPTQSPYLQPRAPPQQEAQQ
EAYSTRGPAPGNSGKANNEDGVPQDRPSSLPISLAPLSPLLSLCLHHTRPRSHTAGRPLA
HGLREDVLDLSGSIDDLPTGTEAGLGSAVSAGGSSSSSSSSQGEQGGASNQGQSPFSPHA
SPHLPSQRSGPSPSPVGSPAGSTQSQQSRSGSGPISPASGPSANTTAAGSTMAPQNTGNG
PDGAHPPITCSPIAQERGFMSNMQRNQASSQFASPQSGPPMSPHPSPGGPLYSGMGPYSQ
SSPSGPYGPQGSQYGHQGNYPRSSNYSGTASTSYSGPGPGMTNSVGMNSSSPMHGQGPGQ
PIPIGRSHGPGSQNRVYPPMAPSSPSMPQPAGPGMGPPSLGSSNRKAQEAAAAAMPGSAN
STLNSLLTPICRRPPYARFPAQMHPPQSTSTHWLALSSTHPPPSPPPRPHHPPILPPSHS
QHYRQGSYQGPGISQASTMATTVLYSQPTGNNSSAMGNAQGPAYNIPPSGAMGMSGDGMM
SPDGKPKTDVKESGPANEPHKPKLQDGYSNNNSSSGSQQCVSQPATPGGALPVPSPLSPS
PASLSSYHGDDSDSISSPPWPLKTPSSPKANPNSSSLSGERITRLFELGVEPERRGWVER
YLNFMEERGTPVAQLPAVGKKPLDLWKLYIAVREIGGLAMVNKNKKWRELSTTLNVGTSS
SSASSLKKQYIQYLFAYECKMERGEEPPADSSSSSSSMAGGDSRKQVKIQPPSPANSGGS
LQGPQTPQSSGSSSTAEAAGDLKPPTPATTPLGQVTPLPPNSFHLLPVPPSRLALSRSSV
SVQDPFSEVSDPAFQKRATSLPPAAPYQQGLSMPDMMMRMQYDTKDPFAGMRKMAGADPY
MPAQMPGGGMQDMYGRPPSALSLSQRSQYPYGSGYDRRSDHVMGMEGSMGPPGSQNNMGP
SNSEGSIYSPSRYPSQQRHDGYGQQYPSMPYGMHPSGMYPQQQQGYKRPMDGMYGPPPKR
HESDMYAMQYANQQPDMYNHYGGGYSGPEHRPIQGQFPFPYPRDRMAPSGQSQHSMMGGG
PTSNHANDGPNMWPSRTDLGYPYPNRQGPPSQMPPYGSIGRDDMDGRPGQEQWHRQSPYM
SSSGGMPPLSSRQPSSYSNSSSMANHLPRAPSPGAFQRSMDSRMSPSKAPFMSPMKMPKP
GMTMMGPQGSGPLGQFPPNLRRDLNYPPGSVEATMPILKPRRKLTSKDTGTPEAWRVMMS
LKSGLLAESTWALDTINILLYDDSTVASFNLSQLPGFLELIVEYFRRCLIKIFGILEEFE
VGTVAQKSLLDPSANQKQEAIPDQETDSIVQPEPESAAAADTQVEQAGGIMEEALPVTAE
PESEVEVNREKEESEVIIKKEDKNEEDREKERKEEEESEKEAERKKECVDQPVAELEPKP
KQASKYDKLPIKIVHKEDLIEDMTEYLGYVTEFNSGLLHWQAGGGDSTVHIQTQFECVSE
PPARADGNTRKENKEENKVDYGKKQPLKHITATIDDVLCARVDALSYAHPARSLPSYPFR
VHLDGEQDHITLLEDEPRCLDEAPLSTTSAWQESLAKRCLCVSNIVRSLSFIPGNDLDMS
RHPALVLLLGRLLLLHHQHPERNRSPPSYQRDEQQEQGLSSSKEEWWWECLSLLRENAMV
TLANISGQLDLSTYPDTICLPILDGLLHWMVCPSAEAQDPFPAAAPHSQLTPQRLVLECL
CKLSILGGNVDLLLATPPFSRQEKLFTVLVRYVGQRKAQVYREMAVAVLSHLAQGDTTAA
RAIAMQKGSVSNLVGFLEDGVSMAQYQQNPHSLLHMGHPPMDPPSINMMCRAAKGLLAMA
KVEENKTEFVLYESRLLDISISSVLNAGVVAIICQVLFHLGKS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagttgcatcggctccgaccagaactaataacaaaaataagaaattatcc
agcggtttgggtccggagctcaattcggggaaatccggaggaggaggaggaggagggacc
atacagcgaactggaccgatgctgggtgccggagatgggactctgaataatgtagaccat
caccgccgaaacgagctcagcatggttcattcaacttccacgactcacaacgctccggac
gggcacgacaaggatgggaataacctcacgtccgccccggcttcgactaattcaacgact
tcctcgatggaaacgggtttgatcgcgaaccacaagctgaaatgtgtggggagcggagat
ccccctcagtctctaccgccgccgcagcagcagccgccgccgcaattcggccaatttacg
ccacatcagcagcgacagatccaaagtaacaacaccgccaataacaacggccagggaccc
cgtggggacagaggtatggatcaccaacaccacggtggcaaagagaacctgttggggagc
cagggggagccacagcagcagcacatgccagggaaaggtgaggtggacctcacctgtaaa
cccgcggagaggatgatgggtaccaggtatgaacactctaacttggggccaaccagtaac
aactctgagtttaataacaactattacaccccaaggccctgctacgagcaacatggcgga
cagcagcaacaaagcactgggatggggataacgcactcttcggcacataacagcatggag
aactcccacgaagcagggtaccacaacagccagtacaatcagtacccggcgtaccgggcg
ggctacagtggcggggcctacggaatgatggggccctctggttgccggcaacctgggaac
atgatgatgggcagcaactcctcagcaagccatggcaagtctcccctgggagctacttcg
ggtggctttcagaggttcccaggacagacccagcagcagcatccctcaggggccaccccg
accctcaaccaactgctgacatcccccagccccatgatgcggggttatggtggtgcatat
caagactacagcggctccacggcgcagcagcaagccggcatgggcctagggaaagacgtg
gggccccagtatggagccacctcggcccacggctggggagggcagcagagaaaccaccct
catttaatgagtcccggcaacggagggcaaggcctcggcaggccgcaggtgtcctccatg
gacttcatggctatgaagcgctcgcagctgtacagcatggccaacaatccctactccacc
ccacagcagcccgggggcgggccttaccctcctagccaaacatacacgtcgccgcctcca
catagatatccaatgagcatgcaggggaggggccaaatgagcatgggcgggatgcagtat
cctcaacagcagcaggtggcgccatatggccagcaggggatggggggttacagccagcag
cagcaggtggggcagcagggaacccctccgtacttcagcccccctcagcagacccctcca
ggcccgacccagagcccctacctgcagcctcgagcaccgccacaacaggaggctcagcag
gaggcctacagcaccaggggtcctgccccagggaactctgggaaggccaacaatgaggat
ggcgttccccaggaccgcccatccagtctgccgatcagcctcgcgccgctgtcacctctc
ctttccctgtgcttacatcacacacgccctcgctcgcacacagctggacggccattggct
catgggctccgcgaggacgttctggatctgtccggctcgattgatgacctccccactggg
acggaggctggtctgggctcagctgtcagcgccggcggctcctccagcagcagcagcagt
agccaaggggaacagggaggggccagcaaccagggacagtcccccttctctcctcacgcc
tccccccatctccccagccagaggagcgggccctctccctcccccgtgggctcgcctgca
ggctccactcagtcccagcagtcgcgatcaggctctggacccatctctcctgccagcgga
ccctctgccaacaccaccgcagcaggttccactatggccccacagaacactggaaatgga
ccagatggagcccacccaccaatcacctgctcacctatagctcaggagagagggttcatg
tccaacatgcagaggaaccaggctagctcccagtttgcttctcctcagtccggacctcct
atgtccccccacccctcacctgggggcccattgtattctgggatgggtccctactcccag
agcagcccctcaggcccttatggacctcaaggatcacagtatggacaccaaggtaactac
cctcggtcctccaactacagtgggactgccagtaccagctacagtggacccggccctggc
atgaccaacagtgttggaatgaactctagcagccccatgcatggccaggggcccggccag
cccatacctataggacgcagccacggcccaggcagccagaacagggtgtacccacccatg
gctcccagctcccccagcatgccccagccagccgggcctgggatgggccctccttctttg
ggtagctctaaccgcaaggctcaggaggcagcagcagctgccatgccaggatctgccaac
tcaacactcaacagtctgttgacaccgatctgcaggcggcctccatatgcgaggttccca
gcccagatgcacccaccccaatccacctccacccactggctcgcactctcttctacccat
ccaccaccttcacctccacccagacctcaccatccacccatcctgccaccctcacattca
cagcactataggcagggcagctatcaaggccctggcatcagccaggcaagcactatggct
accactgtcctgtacagccagccaacaggaaacaacagttcagccatgggcaacgcacaa
ggtccagcctacaatatacctccttcaggagccatgggaatgtcaggagatgggatgatg
agcccagatgggaaaccgaaaacggacgtaaaagaaagcggccctgccaacgagcctcac
aaaccaaagctacaggatggctacagcaacaataacagcagcagtggctcccagcagtgt
gtgtcccagccagccacgccaggcggtgccctgcccgtgccctcccccctatcacccagc
ccagccagcctgtcctcgtaccacggagacgacagcgacagcatcagcagccccccctgg
cccctcaagaccccctctagtcctaaagccaaccctaactcctcctccctcagtggggag
cgaatcacacggctgtttgagctgggtgtggagccggagaggcggggctgggtggagcga
tacctgaacttcatggaagagaggggcacgcctgttgcccagcttcccgctgtgggcaag
aagccgctggacctctggaagctctacatagctgttcgggagataggaggcctcgcaatg
gtaaacaagaacaagaagtggcgcgagctgtccaccaccctgaacgtgggtacatccagc
agctccgccagctcgctcaagaagcagtacatccagtatctgtttgcctatgagtgtaag
atggagagaggagaagagccgccggcagacagcagtagcagcagcagcagcatggctgga
ggggacagcaggaagcaggtcaagatccagccaccctcacctgctaattcgggtggctcc
cttcaaggcccacagacgccccagtcctctggcagcagctctacagcggaggcagcagga
gatctgaaaccccccacacctgccaccacccctctgggacaggtcacaccactgcccccc
aacagcttccaccttctccctgtccctccctcccgccttgccttgtccaggagcagtgta
agtgtacaggaccccttctcagaggtgagcgacccggccttccagaagcgtgctacctcc
ctgccccccgcagctccttaccagcagggcctcagtatgcctgacatgatgatgaggatg
cagtatgacaccaaggaccccttcgccgggatgaggaagatggcaggagctgatccctac
atgccagcccaaatgcccggtggtggtatgcaggacatgtatggtcgacccccgtcagcc
ttgagcctgagccaacggtcgcagtatccatacgggtcaggctatgacaggagatcggac
catgtcatggggatggaggggagcatgggtccccctgggagtcagaacaacatgggacct
tctaacagtgagggcagcatctactctcccagtagatacccttcacagcagagacatgat
ggatacggtcaacagtatcccagcatgccatatgggatgcatccatctgggatgtaccca
cagcaacagcagggctacaaacggcccatggatggcatgtatggccccccacccaagaga
cacgagagcgacatgtatgccatgcagtacgccaaccagcagccggacatgtacaaccac
tacggtggtgggtactcaggccctgaacatagacccatccagggacagttccccttcccc
tatccccgcgaccgcatggccccctcaggtcagagccagcacagtatgatgggtgggggc
cccacctctaaccacgctaatgatggccccaacatgtggccatccaggacagacctcggc
tatccctaccccaacagacaggggccgccatcacaaatgccaccttatggctcgattggt
agagatgacatggacgggcggcccgggcaggagcagtggcaccgtcagtctccctacatg
tcatcatcaggtggcatgcctcccctgtcttcacgccagccatcttcttattccaactct
tcatccatggccaaccatctgcctagagcacccagcccaggagccttccagcgctccatg
gactctaggatgtcacccagtaaagcaccattcatgtcacccatgaagatgcctaagcct
gggatgacgatgatgggcccacagggcagtggaccccttgggcagtttcctcccaacctc
aggcgggacctcaactacccaccaggatcagtcgaagccaccatgccgattctcaagccc
cgacgcaagctcacctccaaggacactggaacgcctgaggcctggcgcgtgatgatgtct
ctgaagtctggcctgctggcagagagcacatgggctctagacaccatcaatatcctgctg
tacgatgacagcactgtggcctcctttaacctctcccagttacctggattcctcgagctg
attgtggagtacttccgccgttgtctgatcaagatctttggcatcctggaagagtttgag
gtggggaccgtggctcagaaaagccttttggacccttctgctaaccagaaacaagaagcc
atccctgaccaggaaacagactctattgtccaacctgaacctgagtcagctgcggcagca
gatacgcaggtggagcaagcaggaggcatcatggaggaagcactaccggtcactgcagag
ccagagtcagaggtggaggtgaatcgtgagaaggaggagtctgaggtgatcataaagaag
gaggacaagaatgaggaggacagagagaaagagcgaaaagaagaggaagagagtgaaaaa
gaagcagagagaaaaaaggagtgtgttgaccagcctgttgcagagctagaacctaaacct
aaacaagccagtaaatatgataagctccccatcaagattgtccacaaagaggacctgatt
gaagacatgacagagtacttaggttacgtcactgagttcaacagcgggttgctacactgg
caggctggtggaggtgattccaccgtacacattcaaacacagtttgagtgtgtgagtgaa
ccacctgccagggcagatggaaacacaagaaaagaaaacaaagaggaaaacaaggtggac
tacggaaagaaacaaccactgaaacatatcactgctactattgatgatgttctgtgtgct
cgggttgacgccctttcttatgcccaccctgcacgctccttgccatcctaccccttcagg
gtgcatctggatggggagcaggaccacatcaccttgctggaggatgagcctcgctgcctg
gacgaggctccgctctccacaacctctgcctggcaggagtccctggccaagcgatgcctc
tgtgtgtccaacatcgtccggagcctgtcctttatcccggggaacgacttggatatgtca
cgccaccctgctctggttcttcttctgggcaggctgctccttctgcaccaccagcacccg
gagaggaacaggtcgccccctagctaccagagagacgaacagcaggagcaggggctgtcg
agtagcaaagaggagtggtggtgggagtgtctgagtctgctcagggagaatgccatggtt
actctggccaacatctcgggtcagctggatctctccacctatccagacactatctgtctc
cccatcttggatggccttctccactggatggtgtgcccttcagctgaagcccaggacccc
ttccctgcagcagcaccccactcccagctcactccccagaggctggtgctggagtgcctc
tgcaagctgagcatcctgggcggcaacgttgacctcctgctagctacgccacctttcagc
cgacaggagaaactcttcactgtcttggtccgctacgtgggtcagaggaaggcccaggtg
tacagggagatggcagtggctgttctctcccacctagcacaaggagacaccacagcggca
cgtgccattgccatgcagaagggcagcgtgagtaatttggtaggcttcttggaggatggt
gttagcatggcacagtaccagcagaaccctcacagcttgctgcacatggggcacccccct
atggacccacctagcataaacatgatgtgcagagcagctaaaggtctgttggctatggct
aaagtggaggagaacaagacagagtttgtgctgtatgaaagcagattattagacatctcc
atttcctcagtgctcaacgcgggagtggtggctattatttgccaagttctctttcactta
gggaaatcatga
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integrated database retrieval system
