KEGG   Siniperca chuatsi (mandarin fish): 122889002
Entry
122889002         CDS       T08948                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03082  ATP-dependent chromatin remodeling
schu03083  Polycomb repressive complex
schu04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122889002
   03083 Polycomb repressive complex
    122889002
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    122889002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122889002
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     122889002
  Histone modification proteins
   HAT complexes
    HATB complex
     122889002
   HDAC complexes
    Sin3A-HDAC complex
     122889002
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     122889002
    PRC2.2
     122889002
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     122889002
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122889002
  Chromatin remodeling factors
   NuRD complex
    122889002
   NuRF complex
    122889002
   NuRF complex (fruit fly)
    122889002
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 eIF2A ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 122889002
NCBI-ProteinID: XP_044079913
LinkDB
Position
LG15:complement(11842572..11847821)
AA seq 427 aa
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGENIEFGGFGSVSGKIEI
EIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQ
KEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHL
LHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGA
ADSEVQA
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggctgataaagacgctgcatttgatgatgctgtggaggagagggtgatcaatgaggag
tacaagatctggaagaagaacacccctttcctctacgacctggtcatgacacacgccctg
gagtggcccagcctcactgcccagtggctgcctgatgtcaccaggccggaagggaaagac
tacagcgtgcacaggctggtcctggggacacacacttctgatgagcagaatcaccttgta
attgcgagcgttcagctcccaaatgatgatgcccagtttgatgcctcacactacgacagc
gagaaaggagaaaatatagagtttggaggctttgggtctgtaagtgggaagatagagatt
gagatcaagatcaaccatgaaggagaagtgaacagagcccggtacatgcctcagaatcct
tgcatcattgccaccaagacccccaccagcgacgtgctggtctttgattacacaaagcac
ccttccaagcctgacccctctggagaatgcaccccagatctgcgtttgagaggccaccag
aaggagggctatggcctctcctggaacccaaacctcagcggctgcctcctcagtgcttca
gatgaccatactatctgcctgtgggacatcagcacagtgcccaaggagggaaagattgtg
gatgccaagaccatcttcacaggacacactgctgtggtggaggatgtttcctggcacctg
ctccacgagtcactctttggatctgttgccgatgaccagaaactcatgatctgggacacg
cggtccaacaacacctccaagcccagccatgcagtggacgcccacaccgctgaggtcaac
tgcctatccttcaatccctacagcgagttcatcctggccactggctctgcagataagact
gtggcactttgggacctgaggaacctgaagctgaagctgcactcatttgagtctcacaag
gacgagatctttcaggttcagtggtctcctcataacgaaaccatcctggcctccagcggc
actgacaggaggctcaacgtctgggacctcagcaagatcggagaggaacagtcaccagag
gatgctgaggatggccctcctgagctgctgttcatccacggcggacacacagctaagatc
tcagacttctcttggaaccccaatgagccttgggtcatctgttctgtatcagaagacaac
atcatgcaagtctggcagatggctgaaaatatctacaatgacgaggacccagaaggtgct
gcagattcagaggtccaggcatga

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