Candidatus Sumerlaea chitinivorans: BRCON_0548
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Entry
BRCON_0548 CDS
T09023
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
schv
Candidatus Sumerlaea chitinivorans
Brite
KEGG Orthology (KO) [BR:
schv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schv03016
]
BRCON_0548
Enzymes [BR:
schv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BRCON_0548
Transfer RNA biogenesis [BR:
schv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BRCON_0548
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXA35325
UniProt:
A0A2Z4Y4G3
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All DBs
Position
complement(611788..612990)
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AA seq
400 aa
AA seq
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MSVHSCQGPLHYVSQQSQVEALAQNIEPGIRVALDTEADSLHHYYEKVCLIQLSFGSHHY
IVDPLAKVRVEPLLEKLAQCTLVIHGADYDLRMLRRQWGFEAHQLFDTMCAAQLLGYEEL
GLASLVKRCCGVTLCKSGQRADWSRRPLSPKLIEYATNDSRYLLCVAERLEHELRIRGRV
EWHREMCQRILENVKCHNTARSEARQWRVKGWHTLKSSRAHAILRELWQWREREAQHADL
PPFRILGNEMLVRLAAWTEATSAGDALPDFIPPHLASSVRRLESLRRAVEHARALPPEKW
PRPSHVNCKQAPKPSKSLCEELKACRDEIAAKYDVPPQLITPSTALLEIAAARPHTCEEL
KAVSKLCNWQVELIGEPFLRIIRAHEHASDVSPASSNLFD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcacagctgccaaggcccattacattatgtcagtcagcagtcccaagtcgag
gcacttgcccaaaacatagaaccgggcattcgtgtggcgctggatactgaagcggacagc
ctccaccattactacgagaaggtgtgtctcatccagttgtcttttggctctcatcactac
attgtggacccacttgcgaaagtgcgcgtcgagccgttattggaaaaattagctcaatgc
accttagtcatccacggggccgactatgatcttcgtatgctgcggcgtcagtggggcttt
gaggcacaccaattgttcgacacaatgtgcgccgcacaacttcttgggtacgaggaactg
ggacttgcatcgttggtcaagaggtgttgtggggtaactttgtgtaaaagcggtcaacgt
gcggactggtcccgtcgaccgcttagccccaagttgatcgaatatgctacaaacgatagc
cgttatctgctgtgcgtagccgagcgattggaacatgagttgcggattcgaggtcgagtc
gaatggcatcgggaaatgtgccaaagaattctcgagaacgtcaaatgccataatacggcc
cggagtgaagcgaggcaatggcgagtcaaaggttggcacactctaaaatcctcacgcgcg
cacgccatccttcgagaactatggcaatggcgcgaacgtgaagctcaacacgcagatcta
ccaccgtttcggatcttggggaacgagatgcttgtccgattggcagcatggaccgaagca
accagcgcaggcgacgctctaccagactttattccccctcaccttgcatccagcgtgcgc
cggcttgaatctctgaggcgtgctgttgaacatgcgcgcgcgttgccccctgaaaaatgg
ccgcgcccgtcgcacgtaaactgcaagcaggctccaaaaccttcaaaatcactctgcgaa
gaattgaaagcgtgccgggacgagatcgcagctaagtatgacgtcccgccacagctcatc
acgcccagtactgccctgctcgagattgcagccgccagaccccacacctgtgaagagttg
aaagccgtgagtaagctgtgcaactggcaggtcgaactgattggcgagcctttcttgcgc
attattcgcgcccacgaacatgcgagtgacgtgagccccgcgagcagcaaccttttcgat
tga
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