Candidatus Sumerlaea chitinivorans: BRCON_0823
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Entry
BRCON_0823 CDS
T09023
Name
(GenBank) 3'->5' exoribonuclease Bsu YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
schv
Candidatus Sumerlaea chitinivorans
Brite
KEGG Orthology (KO) [BR:
schv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schv03019
]
BRCON_0823
Messenger RNA biogenesis [BR:
schv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BRCON_0823
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
BOF
HDOD
RMI2
P21-Arc
Motif
Other DBs
NCBI-ProteinID:
AXA35600
UniProt:
A0A2Z4Y3A3
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All DBs
Position
complement(915381..916424)
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AA seq
347 aa
AA seq
DB search
MLQDVQIRNRKDGTSFATIVLRDATGKITGIMWDNFESLRNQTIKVNDVVQVTGDVQKFQ
NKLQMRVTRVSRVNESDVLLNDLLPSTPFPVEELKKEFRGYLAQIRDKDLKRLVQRIFDD
PKRWDAFCKAPSAVSMHQGYLGGLLEHTVFVTRNALRIAENYPQVNRDLLVAGALLHDIG
KIAEFEYERQIAYTDVGRLIGHIPIGHALIEVECSRIPNFPANKKILIQHMILSHHGHLE
FGSPKRPKTLEAIILHHADLLDAQISNYLEIAGNLQKVGAKWEYSPMFERYIFGGTPDML
QAPPTLLETSSQSSELDHPVRPRSGNRAEEGLSKDDLLGLVEDPLEE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaagacgtgcagattcggaatcgaaaagacggaaccagctttgccaccattgtt
ttgcgtgatgccacgggcaaaatcactggcatcatgtgggataatttcgaatcccttcgc
aaccaaaccataaaggtgaatgatgtcgttcaagttacgggcgatgtccagaagtttcag
aacaagcttcaaatgcgcgtcacgcgggtcagcagggtaaacgagtcggatgttctgctg
aatgatcttcttccatcaacgccgttccccgtcgaggaactgaagaaggagtttcgaggc
tatcttgcgcagattcgtgacaaagatttgaaacggctagtgcagcgcatcttcgacgat
ccaaagcgatgggacgctttctgcaaagccccaagcgctgtatctatgcatcaggggtac
cttgggggattgctcgagcacacagtcttcgtaacgcgaaatgcgctccggatcgctgaa
aactacccacaggtcaaccgcgatctacttgtggcaggtgcactactccatgatattggg
aaaattgccgagtttgagtatgaacgtcagattgcgtacaccgacgttggacgactcatc
gggcatattccgattgggcacgcgctcatcgaggtagagtgcagtcgcatccccaatttc
ccagcgaacaaaaagatcctcattcaacacatgatcctaagccatcacggccaccttgag
ttcgggtcccccaaaagacccaagacattagaggcaattattctccatcacgccgatttg
ttggacgcacagatttccaactatctggagatagctggaaatctgcagaaagtgggagca
aagtgggagtatagcccgatgtttgagcgctatatctttggtggaactcccgacatgctc
caggcaccaccaacgctgcttgaaacatcgtcacaatcgtcggaactcgatcatcccgta
cgaccccgaagtgggaacagggcagaggagggcttgtcgaaggacgatttgctgggattg
gtcgaagaccccttggaagagtag
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