Candidatus Sumerlaea chitinivorans: BRCON_1106
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Entry
BRCON_1106 CDS
T09023
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
schv
Candidatus Sumerlaea chitinivorans
Pathway
schv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
schv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BRCON_1106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schv02000
]
BRCON_1106
Enzymes [BR:
schv01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
BRCON_1106
Transporters [BR:
schv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BRCON_1106
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
STAS
AAA_22
ABC_ATPase
STAS_2
AAA_23
DUF3584
RsgA_GTPase
ABC_membrane_2
AAA_29
DUF6418
AAA_25
nSTAND3
DUF87
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AXA35883
UniProt:
A0A2Z4Y5V2
LinkDB
All DBs
Position
complement(1231183..1233498)
Genome browser
AA seq
771 aa
AA seq
DB search
MSKRRYTDLGLYRRLVTYLHGTKWVVAGLVLAMLFEALFTVTTLSLTRPALELLIKNRLT
DVTKAAEKASFELAPPQPVGEETYALRAAGELAGSRAAEELHGALAALLKPPHKWVILDL
SQVHRIDESGWAQCYFGRMVSAQRGVKLTIILPQGETNLHGLDPHEWFEIYPEGAPPAVA
LLTTKLKDVPVPVLTKKHHTGWISSLKAEFTKRTLPYLERLQDYVMTSSENKFRLLGLIL
GAMVVSALCMVTAAFFAGYLSAYLGNLCLLRLRNHVYRHMLTLDMEYYNRRAVGTLLSTI
MQDVMAISGAIEVLFSNVLKTPLTVVTLIIAMLFISPPLTLLSFGVAPILGLLLYGIGRK
VRKISKRVQEIRAQIASIAEETFSGIRVVKAYNMETKEANRYERESWNVFGRTLKTVIAE
ELGTGLVALLGIVTVSAMILAGGYYVLQTRELSGSDFVLFILFLTQVFRPLKGSSRVIAK
IQRGMAGSDRVFRVLDTKAKIVDDPSAPELRPVQREISFEHVWFRYSAESHHVLKDVHFT
VPAGHVTAIVGETGAGKTTLVNLLPRFYDPTEGRILFDGVDIRSVRLRSLRDQIAIITQD
VILFNDTIARNIAYGMPDDIPRERIIEAAKAANAHNFIMRLPHGYDTVVGGRGVRLSGGE
RQRLAIARAFVKNAPILILDEATSQLDSETEALIQEALSRIIKGRTVFVIAHRLSTILHA
DSILVLDQGKIVERGTHDELVKLGGRYARFYEIQFRQALAAANSKGENSAE
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaacgtcgctacacggatttaggcctttaccggcgtctcgtgacgtatttgcat
ggcaccaagtgggtcgtcgctggccttgtactagcgatgctctttgaggccctgttcaca
gtgacgacactttcgcttactcgtcccgcacttgagcttcttatcaagaaccgtctgacc
gatgtcaccaaggccgctgaaaaagcatcattcgagcttgctccgcctcaacccgttggg
gaggaaacgtatgccttgcgcgccgcaggggaacttgcgggatcacgtgcggcggaggaa
ctccacggcgctttagcagcgttactcaagcccccgcacaagtgggtcattcttgattta
tcacaagttcaccgaattgatgaaagtggctgggcccaatgttattttggccgcatggtt
tctgcacaacgtggcgtcaagctcaccattatcctaccgcaaggggaaaccaatctacat
gggctcgatcctcacgagtggttcgaaatctatcctgagggggctccaccggctgttgca
ctcctcaccactaagctgaaggatgtgcccgtgcccgtgctcacgaaaaagcaccacacg
ggatggatttcgtccctcaaagccgagttcacgaaacgcacacttccgtatcttgagcga
cttcaggactacgtcatgaccagctccgagaataagttccgtttgctgggtctgattctg
ggggccatggtcgtctctgcgctctgcatggtgactgccgccttttttgcggggtacttg
agcgcctatctgggaaacctctgtttgttacggctccgcaaccatgtctacaggcatatg
ctgacgctggacatggagtactacaatcgccgggctgtcggtacgcttctatccacaatc
atgcaagatgtcatggcgatcagcggcgccattgaagtgcttttctcaaatgttctcaaa
acgcctctcacggttgtcacgctcatcatcgcaatgctctttatttctccgccactcacg
ctgctcagttttggcgtcgccccgattctgggattgctgctctatggaattgggcgcaag
gtgcgtaaaatctcaaagcgtgtccaagagatccgtgcccaaattgcctcaatagccgaa
gagacattcagcggaatccgggtcgtgaaggcttacaatatggagacgaaggaggcaaac
cgctacgagcgtgaaagctggaatgttttcggtcgcactctaaaaacagtcatcgccgaa
gagctcggaactggtttggtcgctctcttgggcatcgtgacagtctctgccatgattctg
gcgggtggctactatgtgcttcagactcgcgagcttagcggctcagacttcgtcctcttt
attttgttcctcacacaagttttccgccccctaaagggcagcagccgggtcattgcaaaa
attcaacgtggcatggctgggagtgatcgggtattccgcgtcttagacacaaaagcgaag
attgtggatgacccgagtgctcccgaactgcgacctgtccaacgcgagatttccttcgag
cacgtgtggtttcggtattctgcggagtcccaccatgtgctgaaggatgtccacttcacc
gtccccgccggccatgtcaccgcgattgttggcgaaacgggggcgggtaaaaccaccctt
gtaaatctactgccgcgcttttacgaccccaccgagggacggatcctatttgatggtgtg
gatatccgcagtgttcggctgcgttctctgcgcgaccagattgccatcataactcaggat
gtgattctcttcaatgacaccatcgcccgtaacattgcgtacggtatgccggatgatatt
cctcgggagcgaatcatcgaagccgcaaaagcagcaaatgcccacaattttatcatgcga
ttgccccacggctacgacacagtggtcggtgggcgcggcgtccgtctctcgggcggagaa
cgccaacgtttggccattgcccgtgcatttgtgaagaacgccccaatccttatcctggac
gaggccaccagccagctcgactccgagactgaagctctcatccaagaagcccttagccgc
atcatcaagggccggacggtctttgtcatcgcccaccgactctccacgattctgcatgcg
gacagcattctcgtgcttgatcaggggaaaatcgtagaacgtggtacccacgacgaactt
gtgaaattgggtgggcgatatgcccggttctacgagatccagtttcgccaagcccttgcc
gctgcgaactccaagggggaaaactctgcagaatag
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