Candidatus Sumerlaea chitinivorans: BRCON_1290
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Entry
BRCON_1290 CDS
T09023
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
schv
Candidatus Sumerlaea chitinivorans
Pathway
schv03030
DNA replication
schv03430
Mismatch repair
schv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRCON_1290
03430 Mismatch repair
BRCON_1290
03440 Homologous recombination
BRCON_1290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schv03032
]
BRCON_1290
03400 DNA repair and recombination proteins [BR:
schv03400
]
BRCON_1290
Enzymes [BR:
schv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BRCON_1290
DNA replication proteins [BR:
schv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BRCON_1290
DNA repair and recombination proteins [BR:
schv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BRCON_1290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AXA36067
UniProt:
A0A2Z4Y4D3
LinkDB
All DBs
Position
complement(1440756..1444241)
Genome browser
AA seq
1161 aa
AA seq
DB search
MGKPEFVHLHLHTEYSLLDGACRVKELAEYVAKTGMPAVACTDHGNLFAAIEFYQACCDA
GVKPIIGAELYIAAKGRRSRNEAGVRTSANHILLLAENEEGYRNLCKLSSIGFLEGYYYK
PRIDFEVLAQYNAGLIATSGCLKGLIPESLLEEDEQRAKTYLGQFIDIFGRDRFYIELMD
HGIEQQRRVLPVLVKMARDMGVKTIATNDAHYLQREDAAFHDVLLCIQTGRTLQDPNRMK
YEAEEFYVKTPEEMYAVFRDFPEACRETLAIAERCNVKFDLEGKSYVPQFRTPGGVSPEE
YLRQLAFDGLLRRYGTPTQQHIERLEHELNTIVKMGFASYFLIVWDFIRYAKVNGIPVGP
GRGSAAGSLVAYCLEITDIDPIEHGLLFERFLNPERISMPDIDVDFCFENRGRVIEYVRN
TYGENRVAQIITFGTLQPRAAIRDVGRVMGVAPVKVNKLANLVPKMLKPEKGEKGIDRAL
RETPELKAEYDNDPEVRQILDYIRKLEGMVRHASTHAAGIVICDRDITDIVPVYKAPDSN
DVATQFTMNVIERLGLLKMDFLGLKNLTIIQNTLMAIRKNHGVEIDWQKIGLSDRKTYEL
LASGRTLGVFQLESEGMTNLVRMMKPSRFEDLVALLALYRPGPLGANMHIEYVQCKHGEK
EPTYDHPLIEPILRETYGIILYQEQVMQIAQVLAGFTLGEADLMRRAMGKKKKDVMDKMR
ERFVQGAVANGVDAELAERIFAKIEHFAGYGFNKSHSAAYAVISYRTAYLKAHYPIEYLA
ALMTNAIGGKVEEMMKYFAEARDLGVSVLGPDVNESEKEFAVCGGNIRYGLAAIKNIGEG
VVEAILAARNRGGRFQDFEDFCNRVDLRVLNSRTIECLIRAGAFDSLRHTRAQLLDGYEK
VIEVAQERQRERDLGQISLFEIMGESEEGAGRGPSALGLLRDVPEMPQLEKLRAEKELLG
YYISGHPMDAYQCDQTAFGNCSLAHLPKRRDGDEVNVVAMIGEVVKKKDRNGRDMAFVQI
LDLDATAEAIFFHDAFEKFREYVVPENVLLINGRVNIRDDVPKILVKQVQAIDEVREKAD
YIFEIFADYATVPDTFLSTLRQLLQAHRGKRDVRLTLQLDRGQLIVALPRTFRVRVTNEL
MTEIKRIPGVRRLRFSMENGR
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttgggtaagccagagtttgtccatctccatctccacacagaatatagtttgctcgatggc
gcttgccgggtaaaggagctcgcggagtatgtcgcaaaaaccggcatgccggccgtcgcg
tgtaccgatcacggcaacttgtttgcagcgattgaattttatcaggcatgttgcgatgct
ggcgtaaagcccatcattggagctgaactatatatcgcggcgaaggggcgtcgaagccga
aatgaagctggagtccggacgtccgcaaatcatattctgctgctggccgaaaacgaagaa
ggataccgcaacctctgcaagctttcttcgatcggattcctggaagggtactactataag
ccccggatcgattttgaagtgcttgcgcaatacaacgctggccttattgcaacgagcggt
tgccttaaaggcctgatcccggagtcgctgctcgaggaggacgagcaacgcgccaaaacg
tatttgggccagtttatcgatattttcggtagggaccgattctatatcgagctcatggac
catggcatcgaacagcagcgcagggtcctacccgtcctggtcaaaatggcccgcgacatg
ggggtcaaaaccatcgccacaaacgatgcccattatttgcagcgcgaggatgctgcattt
catgatgtattgctctgcatccagacgggccgcacgttgcaggaccccaaccggatgaag
tacgaagccgaagaattctacgtgaaaactccggaggagatgtacgcggtttttcgagat
ttcccggaggcctgccgcgagacgttggctattgctgagcgctgcaacgtcaagttcgac
ctcgaaggaaaaagctacgtgccacagtttcgaacgcccggcggtgtgtcgcccgaagaa
tacctgcggcagttagcattcgacggactcctcagacgctacggcacgccaactcaacaa
catattgagcggctggagcatgagctcaacaccatcgtcaagatgggcttcgcgtcctac
ttcctcattgtctgggactttattcgttacgcaaaggtcaacggcatccccgttggcccc
ggccgtggaagtgccgccggttcccttgtcgcttattgtttagagattacggatatcgac
ccgatcgagcatgggctcctatttgagcgatttctcaatcctgaacgcatctcgatgccc
gatatagacgtggatttttgcttcgagaatcgcgggcgtgtgattgagtacgtgcgaaac
acatacggtgaaaaccgggtggcccagattattacgtttgggactcttcagccacgagct
gcaatccgcgatgttggccgggtgatgggcgttgccccggtgaaagtaaacaaattggcc
aaccttgtccctaaaatgctcaagcccgaaaaaggcgagaagggcattgaccgtgcctta
cgtgagacccctgagctaaaggctgagtacgataacgatcccgaggttcgccagatcctt
gattacattcggaaactcgaggggatggtgcgccatgccagcacgcacgccgctgggatt
gtgatttgcgatcgcgacatcacggacattgttcctgtttacaaagcccccgactcaaac
gacgtggccacccaatttaccatgaacgtgatcgagaggcttggccttttgaaaatggac
tttcttggcctaaaaaacctcacgatcatccaaaacaccctcatggccatccgcaaaaat
cacggcgtggaaattgactggcagaagattggcctgtccgatcgcaaaacctacgagttg
ctcgcatcggggcgcacccttggtgtctttcagttggaatctgagggcatgacgaacctc
gtgcgaatgatgaaaccttcacgtttcgaggacctcgtcgcgctactcgccctctatcgg
ccgggcccccttggagccaacatgcatatcgagtacgtccagtgcaagcacggggaaaaa
gagccaacctacgaccacccactcattgagccaattctgcgcgaaacttacgggatcatt
ctctatcaagagcaagtcatgcagattgcccaagtgttggccggtttcacgctgggtgaa
gcagacctcatgcgacgcgccatggggaaaaagaaaaaggatgtcatggacaagatgcgc
gagcgctttgtccaaggcgcggtggcaaatggggtggatgccgagcttgccgaacggatc
tttgccaaaattgaacacttcgcgggctacggattcaataaatcgcattcagcagcttac
gcagtcatctcctaccgaacagcctacctcaaggcccactatccgatcgaatatcttgcc
gcactcatgacgaatgcgattggcggtaaggttgaggaaatgatgaagtacttcgccgaa
gcacgcgacctcggcgtgagtgttttaggtcctgatgtgaacgagtccgaaaaagagttc
gcagtgtgtggcggcaacattcgctatggactggctgcaatcaaaaacatcggcgagggc
gtcgtggaggcgatcctcgcggcacgcaaccgtggtggccgattccaagatttcgaggat
ttctgtaaccgggtggatctgcgagtgctcaatagccggacgatcgaatgtttgattcgc
gcaggcgcttttgattccctccgtcacacgcgggctcagttactcgacggatacgagaag
gtgatcgaggttgcccaagagcgccaacgagagcgcgatcttgggcaaataagccttttt
gagatcatgggcgaaagcgaagagggggcagggcgtggtccatccgcgcttggcctcttg
agagatgttccagaaatgccccagttagaaaagttgcgtgccgagaaggagctgctcggt
tattacatctcgggacatcctatggatgcatatcagtgcgatcagacggcatttgggaat
tgttccctcgcccatcttcccaagcgtcgcgatggcgacgaggtcaacgtggttgccatg
attggcgaggtcgtaaaaaagaaggaccggaatggccgcgatatggcattcgttcagatt
ctcgatctcgacgcgaccgctgaagccattttcttccacgatgcctttgaaaaatttcgc
gagtatgttgttcccgagaacgtcctcctgatcaacggtcgcgtaaacattcgagacgat
gtcccgaagatccttgtgaagcaagtgcaggcaatcgacgaggtcagagaaaaagccgac
tacattttcgaaatcttcgccgactatgccacggttcctgacacctttctgtcgaccctc
cggcaactcctgcaagctcaccgcggaaagcgtgacgtgcgattgacccttcagcttgat
cgtggtcaactgatcgtcgcgctgccgcggacttttcgtgtccgagtgaccaatgaactg
atgaccgagatcaagcgaattcccggcgtgcggaggctacgcttctcaatggagaacggc
cggtga
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