Candidatus Sumerlaea chitinivorans: BRCON_1368
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Entry
BRCON_1368 CDS
T09023
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
schv
Candidatus Sumerlaea chitinivorans
Pathway
schv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
schv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRCON_1368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schv03021
]
BRCON_1368
03400 DNA repair and recombination proteins [BR:
schv03400
]
BRCON_1368
Enzymes [BR:
schv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRCON_1368
Transcription machinery [BR:
schv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BRCON_1368
DNA repair and recombination proteins [BR:
schv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BRCON_1368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Spectrin_7
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AXA36145
UniProt:
A0A2Z4Y6V9
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All DBs
Position
1529711..1530760
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AA seq
349 aa
AA seq
DB search
MDFKLPRSPRELVTDKATLTETYGRFIAEPFERGFGTTIGNSLRRILLSSIQGAAVTALQ
IEGKVHEFDTIEGVKEDILDITLNLKSLRLKMLSQKGEAILRLNAEGPKNVTAADFETDG
AVEILNPDQHIATLSKGAKLVMACYVQMGRGYVPAQQIKEESPLRNSFGTIFLDAAFSPI
INVKVTVEAARFERRTDYDRLILEVTTNGTIKPEDAISCAAKILRDHLNLFISMKDQEAE
LAAREEELETENAIQALREKLDKSIEELELSVRSYNCLEAAGIKTIRDLIQKTESEMLKY
RNFGRKSLNEIKTILKEMGLRFNMEIDPETGLPKGMFPEAKIGSGQKNY
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaaactgccgagatcgcctcgtgagttagtcacggacaaggcgacattgacg
gaaacgtatgggcgctttattgctgaaccgttcgagcgcggattcggtaccacgatcgga
aactcacttcgccggattcttttgagctcgatccaaggtgcagcggtaacggcgcttcag
attgagggcaaggtacacgaatttgacacgattgagggtgtgaaggaagacatcttagac
attaccctcaacctcaaaagccttcggctgaagatgctcagccagaagggcgaggctatc
ttgcgactcaatgctgagggaccgaaaaacgtcaccgcagccgacttcgaaaccgatggc
gctgtggagatcctgaatcccgatcagcacattgctacgctctccaaaggcgccaaactc
gtgatggcctgctacgttcaaatggggcgcggctatgttccagcccaacagattaaggaa
gagtcgcccctgcggaactctttcggcacgatcttcctcgatgcagccttctcccctatc
atcaacgtcaaagtgactgtggaggctgcccgttttgagcggcgcactgactacgaccgc
ttgatccttgaggttacaacaaacggcacaatcaaacccgaggatgccatcagctgtgcc
gcgaaaattctccgcgaccacctgaatctattcatttcgatgaaggatcaggaagcggag
ttggcagctcgggaagaggaactggaaaccgagaatgcaatccaagcattgcgcgagaag
ctcgacaagagcatcgaggagcttgagttgagcgtgcgcagctacaactgcttggaggcc
gctggcatcaagaccattcgcgacctcatccaaaagaccgagagcgaaatgctcaagtat
cgcaactttggccgcaagtccctcaatgaaatcaagacgatcctcaaagaaatgggattg
cggttcaacatggagatcgatcctgaaaccgggctcccgaaggggatgttccctgaagca
aagattggctcaggtcagaaaaattactaa
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