Candidatus Sumerlaea chitinivorans: BRCON_1738
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Entry
BRCON_1738 CDS
T09023
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
schv
Candidatus Sumerlaea chitinivorans
Pathway
schv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRCON_1738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schv03019
]
BRCON_1738
03009 Ribosome biogenesis [BR:
schv03009
]
BRCON_1738
Enzymes [BR:
schv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRCON_1738
Messenger RNA biogenesis [BR:
schv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRCON_1738
Ribosome biogenesis [BR:
schv03009
]
Prokaryotic type
rRNA helicases
BRCON_1738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AXA36515
UniProt:
A0A2Z4Y7W3
LinkDB
All DBs
Position
1988115..1989782
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AA seq
555 aa
AA seq
DB search
MKRKSDEDSRQDMNSENTNLFQGDKQEAALPGQQSGEVEVGRPHLSTQKPESHGVNAEGT
ASEEDLNAGAPDELVEPEQPLPRVSLADLPDWLRARAQEIGWNELRDVQAMTIPYVRARR
DLMVQAKTGSGKTGAYLLPILEALDPALAACQALVLVPTRELALQVHTEATRLAGGAGIR
AVAVYGGVGYGAQLDALRRGAHIVVGTPGRLLDHLKRGSLQLDDVRYLILDEADRMLSMG
FYPDMRELRKSLPSERASYMFSATFPANVLRLAREFLRDPGFLSLSRDAVYVASTEHVYY
EVPALDKDRILIRLIEIENPSAAIIFCNTKQRVNYVATVLQRFGYDADQLTADLSQSERE
GVLRRLREGRLRFLVATDLAGRGIDISHLSHVFQYEVPEDPEAYIHRAGRTGRSGGAGTV
ISLVSYAELADFNRIMRQYGIPAEKRPLPSEEDVMAIVEQRVTALLEAKLRDRDPLQLER
MRRFVGLARRLAEAEEELDVIAMLIDDYYQETLHKVPVPEGGAAPKASAPRQKQGPSAPK
SVRRRRRSRGEGRSH
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaatcggacgaagattctcggcaggacatgaattctgagaacacaaacctt
tttcagggtgataagcaagaggccgccttgcctggacagcaaagtggggaggtcgaggtg
gggcggccccatttaagcacgcagaagccggaaagccacggagtgaacgctgagggcacc
gcttccgaagaagatctgaacgccggcgcgccggatgaacttgtcgagccggaacagccg
cttccgcgtgttagccttgcggatttgcccgactggctacgcgcacgagcacaggagatc
ggttggaacgagctgcgggacgtgcaggccatgacgattccctatgtgcgggcacgacgc
gatctcatggttcaggcaaaaaccgggagtggcaagacgggtgcgtatcttttgccaatt
cttgaagctctggatccggcccttgcagcgtgtcaggcacttgtgctggtccccacccgc
gagctggctttgcaggtacatacggaggcgactcgactcgccggtggcgctgggattcgc
gccgtcgctgtgtacggtggagttggatatggggctcagctggatgctctccgtcggggt
gcgcacatcgtggtgggaacgccgggacgtctgctcgaccacctgaagcggggctcgctt
cagctcgacgatgttcgttacctgattctcgatgaagccgatcgcatgctttcgatgggg
ttctaccctgacatgcgtgagctgcgcaaaagtttgccaagtgaacgcgccagctacatg
ttttccgccactttccccgcgaacgttcttcggctggcacgcgagttcttgcgcgacccc
ggtttcctgagcctaagtcgcgacgctgtctacgtggcctcaaccgaacacgtctactat
gaggtgcctgcgctggacaaggatcgaatccttatacgtcttatcgaaattgagaatcca
agcgcggcaatcatcttctgcaacaccaagcagcgcgtgaactatgtggcgactgttttg
cagcgatttggctacgacgccgaccaactcaccgcggatctttcgcagagcgagcgcgag
ggggtccttcgacgcctccgcgagggacggctgcgttttctggtggcaacagatttagcg
ggacgcggaattgacattagccacctctctcacgtctttcagtacgaggtccccgaagat
ccagaagcctacattcaccgagccgggcgcacagggcgcagcggaggagcaggcacagtg
atctcgctcgtgtcgtatgccgagctggcagacttcaaccggatcatgcgccaatacggt
atccccgcggaaaaacgcccgcttccgtcggaggaagacgtcatggccatcgtcgaacag
cgggtaaccgcgctcctcgaagcaaagcttcgggaccgggatccgttgcaacttgaacgc
atgcggcgctttgtcgggcttgctcggcgtctcgccgaagcagaagaggagctcgacgtt
atcgcaatgctcatcgacgattattaccaagagactttgcacaaggtgcctgtgccggaa
ggcggggcggcgcccaaggcctcggcgccacgccaaaagcaagggccatccgctccaaaa
tccgtgcgtcgtcgccggcggagcaggggcgagggccgaagccattag
DBGET
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