Candidatus Sumerlaea chitinivorans: BRCON_1829
Help
Entry
BRCON_1829 CDS
T09023
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
schv
Candidatus Sumerlaea chitinivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
PAS
PAS_3
PAS_9
GGDEF
PAS_4
PAS_8
GAF
GAF_2
GAF_3
PAS_7
PAS_10
Diguanyl_cycl_sensor
DUF4325
Motif
Other DBs
NCBI-ProteinID:
AXA36606
UniProt:
A0A2Z4Y6J2
LinkDB
All DBs
Position
2084322..2088518
Genome browser
AA seq
1398 aa
AA seq
DB search
MRTDKQHDQPSGQHQHPQLVPDAHLLRLLYETMNDGVVGFDAQGRILFCNPAMAQLVGCR
QEELLGKTAQEAWGGEPIELPDETASTGGSFRIRRTDGTIRVVTARSFFLRTAPPVQVAI
YRDITRWRTVERTLTALLSSAVMSSEQTISAKLVEELARVLNTPWALLGRLDPEDRMLLH
VHACWDRGGLGAPFSCRLETSPCANLTPDSICYYKQGVYQLFPDEPFLSSHKIECFLGAP
LLTADHKIFGVIAAMSDRPLQEPYDARTILGIFANHAAMALQQFEGQRILRETQARFEAL
VGQARQGFYLRELDPPRILYVNDTLVNMFGYTRDEMLAMHPLEAVIPDERERVRQAIAEM
TQTRQPFVVSFTGLRKDGSTFAAELFPSFVTYRGRPCLQATVLDISERVKLEREHEILAQ
FAEELAGADSVEEITRSVRNTTHTLLEWEAFFLAVYRPGAERYKIVEFVDTVDGKLQIFP
GRTKLVSDAGHAVRRCLNGEALLIQQDPDHPTSELSPFGDISHRCRSLMYAPVRTPSGVI
GVISVQSYSKSFTESDLHLLERVAETMAPALERARAEQLVRASEERYRTLVETAPMGILL
ISDFAIRYANPAAIRMLGANSEADLLELPIDRFLHSSMREVFRERLSDVLTQGRGTPAVE
LDLMRLDGQRIVVESQESPTDYQGRPAALIVLNDITERKRALAKLQESEQQLKLLFDQTP
LGVIRWNRDFKVVDWNPAATRIFGYKREEALGRHGLELIVPPSARSHVEQVWAALLHQKG
GARSQNANVTKDGRLIICEWYNTPLVSESGQVIGVASIVDDITERMRTEQALRESEERYA
LAARGANDGIWDWNLRTGVVYYSPRWKAMLGIPEDEVLTSPNDWFRRVHPDDLSLLRSAI
TSHLEGATEQLEIEHRVRHSDGSYRWMLCRGLAVRSSDGEATRMAGSITDITARKEAEAQ
IRYDALHDALTGLPNRTLFLEHVEHSIAIARRDPHYKFAVLVFDIDRFKLVNDTLGHSAG
DHLLREVAKRLRGTMRSGDVLARLGGDEFAVLLDDIEAPAMSVTLANQLLDALAKPFRLR
EQEIFVTASIGIAFASRDDASAEEVLRDADTAMFHAKATGKARVVTFDQSMHARFRHQLQ
VETELRRALERNEFEVLYQPIVRADTHRIWGAEALIRWRHPHRALLNPYEFLAIAEDTGL
IVPIGRLVLEHACSQCATWNAVETHEGSPIVVSVNVSARQLADATFIHDLDQILASTKVT
PANLMIEITETVLLAEHEITQRTIAALRDRGILLAVDDFGTGYSSLGYLQRIPLDVLKVD
RSFVSALGTPREHPEIIRTVAALGRDLGLAVVAEGVETQAHAALAAELGCTLLQGFYFAA
PSTAETLTSSLRNDGAGL
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaccgacaaacaacacgaccaaccatcaggtcagcaccagcatccccagctggtt
cctgacgctcacctgctgcgactactgtacgaaactatgaacgacggggttgtgggattc
gatgcacagggccgcattcttttctgtaatcctgccatggcccaactggtgggatgtcgc
caagaagagcttctcgggaagacagctcaggaagcttggggaggcgaaccaattgaattg
ccggacgaaaccgcttcgacgggaggttccttccggattcgccgtaccgacggaaccatt
cgcgttgtcactgcgcgcagtttctttttacgaaccgccccacccgtgcaagtggccatc
tatcgcgacatcacccggtggcgcacggtcgaacgcacgctgaccgcactgctttcttcc
gctgtaatgagttcggagcaaacgatcagcgccaagcttgtggaagagcttgcgcgcgtc
ctcaacactccgtgggcactgctcggtcgcctcgatccagaagaccggatgcttctgcac
gttcatgcatgctgggatcgaggggggttaggtgcccctttctcctgccggcttgagacg
agcccctgcgcaaatctgacgccggattcgatatgctattataagcaaggagtttatcag
ctctttcccgacgagccgttcctgagttcccataaaatcgaatgctttctgggggcgccg
ctcctcacggccgaccacaaaatctttggggtgatcgcggcgatgagtgaccggccgttg
caagagccttatgatgcgcgaacaatccttgggatctttgcaaatcatgcagcgatggcc
ttgcaacagttcgaaggccagcgaatccttcgcgagacccaagctcggtttgaagctttg
gtgggacaggcccgccaaggcttttacctcagagaactcgatcccccccgcatcctctac
gtcaacgacacgttggtgaacatgtttggctacacccgcgatgagatgctcgccatgcac
cctttggaggcggtgatccccgacgaacgtgagcgcgtgcgtcaggccatcgctgagatg
acgcaaacccgccaaccgtttgtggtatcgtttacaggcctgcgaaaagacggaagcacc
tttgcggcagaattattcccttcttttgtcacctatcgtggccgcccctgcttacaagcg
acggtccttgatattagcgaacgggtgaaactcgaacgcgagcacgagattcttgcccag
ttcgcggaagagcttgcgggggcagattctgtggaagaaatcacgcgcagcgtgcgaaac
acgacccacacgttgctcgaatgggaggctttcttcttggccgtttatcggccgggcgca
gagcgctacaagatcgtcgaatttgtagatacagtcgatggcaaactacagatttttcca
ggcaggacaaaactcgtttcagacgctggacatgcggtacgacgctgcttgaacggcgaa
gcgctactcattcagcaggatccggatcatccaacctctgaattgtcgccgtttggtgat
atcagccaccgatgccgctccttgatgtacgcaccggtgcgcaccccaagcggggtgatc
ggagtgatctcggttcaatcgtactcgaagagtttcacggaaagcgatctacatctgctt
gagcgtgtggccgaaaccatggcgcccgctctcgaacgggccagagcagaacagctcgtc
cgcgcaagtgaagagcgttaccgtacacttgtcgagacagcgcctatgggaatcttgcta
atttcggattttgcgattcgctacgcaaatcccgccgccattcgaatgcttggtgcaaat
tctgaggcagacttacttgagctaccaatcgacagatttttgcacagcagcatgcgcgaa
gtgtttcgtgagcgactctccgacgtgctgacgcaagggcgaggcacccctgccgtcgaa
ctcgatttaatgcgcttggatggacaacgaattgtcgtcgaatcgcaggagagcccaacc
gactatcaagggcgacccgcagccctcattgttctgaacgacatcaccgagcgaaaacgc
gcgctggccaaactccaggaatccgagcagcagcttaaactgctgtttgatcaaacccct
ttgggcgtcatccgctggaaccgagacttcaaagttgtggactggaatccggcagcaaca
cggattttcggatacaaacgggaagaagcgctggggcgccacggactcgagttgattgtt
cccccctcagcccgttcccacgtggaacaagtgtgggcagcattgctgcatcagaaaggt
ggcgctcgctcccaaaacgcaaatgtgactaaagatggtcgcctaatcatctgcgagtgg
tacaacacgccgcttgtcagtgaatcgggtcaagtcattggggtcgcctcaatcgttgac
gatatcaccgagcgaatgcgcaccgagcaggccttgcgcgaaagcgaagagcgttacgcg
ctggccgcacgtggcgctaacgatggaatctgggattggaaccttcgcacaggcgtcgtg
tattattcaccccgttggaaagctatgcttgggatccccgaggacgaggtccttacgagc
cccaacgactggttccgtcgagtgcatccagatgatctcagcctgcttcggagtgccatt
acgtcgcatcttgagggagcgactgagcaattggagatcgaacaccgtgtgcgccacagc
gacggtagttatcggtggatgctatgccgtggtcttgccgtgcgctcttcggacggagaa
gccacgcgaatggccggttccatcacggatattaccgcgcgcaaggaagccgaagcacag
atccgctacgatgctctccacgacgcactcacgggcctgcccaatcgcacgctgttctta
gagcacgtggaacactccatagcgatcgcgcggcgggatcctcactacaagtttgcggtg
ctcgttttcgacatcgaccgcttcaaacttgtgaatgacactttggggcactccgctgga
gatcatctcttgcgtgaagtggccaagcgcctgcgtggcaccatgcgttctggtgacgtg
cttgcacggctgggaggcgacgagttcgctgttctcctcgacgatattgaagcgcccgca
atgagcgtgactttggcgaatcagctcttggacgctctcgccaagcccttccgactccgg
gagcaggagatcttcgtgaccgctagcatcggcatcgcctttgcctcacgcgacgacgca
tccgccgaggaagtcctacgcgatgcagacacggccatgttccacgccaaagctactggc
aaggcgcgggtggtcactttcgaccaaagcatgcacgctcgcttccgccaccagcttcaa
gttgagacggaactgcggcgcgcccttgagcgaaacgaattcgaagtgctctaccaaccc
atcgtgcgtgcggacactcatcgcatatggggcgctgaggctctgatacgttggcgtcat
ccccaccgcgcacttctcaatccgtacgagtttctcgctatcgccgaggatacaggcctg
attgtgccaattggccgattggtcctcgagcatgcgtgcagccaatgtgccacgtggaat
gccgtcgagactcatgagggctcccccattgttgtctctgtgaacgtttccgctcggcag
cttgccgatgcgacgttcatccatgatcttgaccagattctcgcgagcaccaaggtgact
ccggcgaacctgatgatcgaaattacagagaccgtcctgctcgccgaacacgaaatcacg
caacgaaccattgctgcactgcgcgaccgcggcattctcctcgccgttgacgatttcggt
actggctattcttcactcggttacctgcagcgcattcctctcgatgtcctcaaggtggac
cgctcttttgtttcagccttgggaaccccacgcgaacatccagaaatcattcggacagtc
gcggcgctcggccgtgatctggggctcgcggtcgtcgcagaaggagtggaaacacaggcc
cacgcggcattagcggccgagctcggatgcacgcttcttcaagggttctatttcgctgca
ccgagcaccgccgaaacgctcacctcctcgctccggaacgatggggctggcttgtag
DBGET
integrated database retrieval system
