Candidatus Sumerlaea chitinivorans: BRCON_2585
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Entry
BRCON_2585 CDS
T09023
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
schv
Candidatus Sumerlaea chitinivorans
Pathway
schv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
schv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRCON_2585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schv03021
]
BRCON_2585
03400 DNA repair and recombination proteins [BR:
schv03400
]
BRCON_2585
Enzymes [BR:
schv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRCON_2585
Transcription machinery [BR:
schv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BRCON_2585
DNA repair and recombination proteins [BR:
schv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BRCON_2585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AXA37327
UniProt:
A0A2Z4Y7U3
LinkDB
All DBs
Position
2904599..2908984
Genome browser
AA seq
1461 aa
AA seq
DB search
MDKKPKEKTTRSAKATRVGRRVAQQPMEKLAFEGVREVQAIDLSKYRPIPLSVETGEELP
DLNAITCVARISLASPEQILAWSRRQSRAAERRIAAQSTRLSEELDLASFGEVKKPETIN
YRTFKPERDGLFCERIFGPTKDWECSCGKYKRIKYKGIVCDRCGVEVIESKVRRTRMGHI
KLASPVCHIWFYRGSGSRIAALLDMSSKDVSKVIYLQNYVVIDPGDTPLQEKQILTDEEA
RKYREMYGDKVKIGIGAEAIKELLSRIDIEELATTLAIEMRKATSAQRRTKIIKRLKVVE
AFRGSGNRPEWMVLDVLPVIPPDLRLLVHLDGGRFATSDLNDLYRRVINRNNRLKKLMEL
KAPEVILRNEKRMLQEAVDALFDNSKRTRPTKGHNGRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPELRFNECGLPKKMALELFDPFIIRELERRGITNSIKTAKKMMERET
PEVYDILDDIIKDHPVLLNRAPTLHRLGIQAFMPKLIEGKAIQLHPLACTAFNADFDGDQ
MAVHVPLSVEAKLEAKNIMLAENNILSPASGKPIATPSQDVVLGIFYLTKMVPNEERYAG
VKSEEEKMARMPRFASPEECIMAFNHKVVKVHEEVIVRLPSGRKVRTTPGRVIFSQIMPP
EIDYFDTESYPSFANQVLSKGQLSQIVAVAHRRVGKTRCAELLDRMKDLGFYWAKRGGIS
MCIDDLIIPPSKNTIIEETRKRVEAIKDQWRQGHISYGERYQRVVHEWNLAGDRIAEELL
KVLEKDQNGLNPVFMMAHSGARGNESQIRQLAGMRGLMQKPTKKITGEIGEIIESPITSN
FREGLTVLEYFISTHGARKGLADTALKTSDAGYLTRRLVDVAQDLIITEEDCGTHDGIYV
SALKEITTTGERELEPLADRIIGRVAARDVIHPKTGEVIVRRNEEITEDAAKVIERAGIE
QVMIRSVLTCATSRGICVKCYGRNLATGRMVEQGEAVGVIAAQSIGEPGTQLTLRTFHIG
GMASLTVEGWYQASQSGIVRFRDLNFVETKGGRRIVINRGGMIIIESPDGVPLQRLPNVP
YGARLRVVDGQEVKRGERLAEWDPHFTPILTEVSGRVRLVDILLGSTMREEIDPTTGAVS
RVISEHREERHPSIQILDDKDNVVAQYALSAGTILERDLADGKKVVAGEMLARIPRAHAK
SKDITGGLPRVEELFEARKPKDAAVLADISGVLHIRGSGRGGRKVTITGDNGEERLYTIP
ISRHLIVTDGQRVEAGDMITDGTPAPHDILAIKGEKAVMEFLLSEVQEVYRLQKVSINDK
HIECIIRQMLKKVVVEEVGNTRFLYGQQVDRAEFEEENRITVEMGGTPAKARPKLLGITK
ASLETESFISAASFQETARVLADAAVRGRIDHLRGLKENVIMGLLIPAGTGLVKYRNIEV
RPVAQAQLEVAGESSQESAGA
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagccaaaagagaaaacaactcgttcggcgaaagctacacgcgtggggcgc
cgcgtggcgcaacagccaatggagaagctcgcctttgaaggcgtgcgcgaggtccaggca
atcgacttgtcgaagtatcgcccaattcccctgagtgtggaaacgggtgaagaactgcca
gacctgaatgcgatcacttgtgtggctcgaatttcgttggcttcgcctgagcaaatcctg
gcatggtcgcgtcgccagtcacgcgcggcggaacgacgcattgccgctcagtccacccgc
ttgtccgaagagctcgaccttgccagcttcggcgaagtaaaaaagcccgaaacgatcaat
taccgaaccttcaaacccgagcgcgacggattgttctgcgagcgtatctttggcccgacg
aaggactgggaatgctcatgcggcaagtacaagcgcatcaaatacaagggaatcgtatgc
gatcgctgtggcgtggaggtgatcgaaagcaaagtccgccgcacgcgaatggggcacatc
aagcttgcctctccggtgtgccacatctggttttatcgaggatcgggaagccgtattgcc
gccctcctcgatatgagctcaaaagacgtttcgaaagtcatctatctgcagaattatgtc
gtcattgatccgggggatacccctcttcaggagaagcagattctcacggacgaagaagct
cgcaagtaccgtgagatgtacggcgacaaagtgaaaatcggtattggcgccgaagccatc
aaagagcttctcagccggatcgacattgaggagctggcgacgacgttagctatcgagatg
cgcaaagctaccagcgctcagcgccgcacaaagatcatcaagcggcttaaggtcgtcgaa
gccttccgcggttctggcaaccggccggagtggatggttctcgatgtgctgccggtgatt
ccccccgatttgcggctgctcgtgcatctcgatggcgggcgatttgctacaagtgatttg
aatgacctgtatcggcgcgtcatcaaccgcaataaccgtctgaagaagctcatggagctc
aaggctccagaggtcatcctgcgcaacgagaaacgtatgctgcaggaggcggtggacgca
ctctttgataattccaagcgcacccgacccacgaaggggcacaacggccggccgctcaaa
tccctgagtgatatgctcaagggtaagcaagggcgtttccgtcagaacttactgggtaag
cgtgttgactactccggccgctccgtgatcgtggtgggtcccgagttgcggttcaacgag
tgcggattaccgaagaaaatggcgctcgagctctttgatccgttcatcattcgcgagctt
gagcgtcgtggcatcacgaatagcatcaagaccgccaaaaagatgatggagcgcgaaact
ccagaggtttacgacattctggatgacatcatcaaagatcatccggtgctcctgaaccgc
gctcccacacttcaccggcttggcatccaagcgttcatgcccaagctcattgagggcaag
gccattcagcttcatccgctcgcctgcacggcattcaacgctgactttgacggcgaccag
atggccgtgcacgtcccactgtcggttgaggcaaaactggaagccaagaacatcatgctg
gcggagaataacatcctttcgcctgccagcgggaaaccgatcgccacgccctcgcaggac
gtcgtcctcgggattttctatctcacgaagatggtcccgaacgaggagcggtacgcgggt
gtgaagagtgaagaagaaaagatggcccggatgccgcgttttgcttcccccgaagagtgc
atcatggctttcaaccacaaggtggtgaaagtgcacgaggaagtaattgtgcgtctgccc
tcggggcgcaaggttcgcacgactcctggcagggtcatcttctcgcagatcatgccccca
gaaatcgattacttcgacacagagtcttatccatcgtttgcgaaccaggtactttcaaag
ggccagctgtctcagattgtggcagttgcgcatcggcgcgtaggcaagacgcgttgtgcg
gagctcttggaccgcatgaaagatcttgggttctattgggcaaagcgcgggggcatctcc
atgtgcattgacgatttgatcattcccccgtcgaaaaatacgattatcgaagagacccgc
aagcgcgtggaagccattaaggatcagtggcgccaaggtcacatctcctatggcgagcgc
tatcagcgtgtggtccacgagtggaaccttgccggcgaccgcatcgctgaggagttgctc
aaagtcctcgaaaaggaccagaacggcctgaacccggtcttcatgatggcccactccggt
gcgcgcggtaatgagtcgcagatccgccagcttgcgggtatgcgcggcctgatgcagaag
ccgacaaagaaaatcacgggtgagatcggcgagatcattgaaagccccatcacctcgaac
ttccgcgaaggtctcaccgtgctcgagtacttcatctcgacccacggtgcccgcaaggga
ttggccgacaccgcgctcaagacgtcagacgctggatatctgactcgccgtttggtggac
gtggctcaagacctgatcatcaccgaagaggattgcggcacgcacgacggcatttatgtg
tccgcattgaaggaaatcacgacgaccggtgagcgggagctcgagccgttggccgaccgt
attatcggtcgtgttgccgcccgcgatgtgattcacccaaagacgggtgaagtgatcgta
cggcgcaacgaagaaatcaccgaagatgccgcgaaggtgatcgagcgcgcgggcattgag
caggtgatgatccgcagcgtcctgacctgcgccacctcgcgcgggatttgtgtgaaatgc
tacggccgcaaccttgcgactggccgaatggttgagcaaggcgaggcggtgggcgtgatt
gctgctcaatccatcggtgagcccggaacgcagctcacactccgaaccttccacattggc
ggtatggcgtccctgacggtggaaggatggtaccaagcatcgcaaagcggtatcgttcgc
ttccgtgacttgaattttgtcgagacgaaaggcggacgccgcattgtgatcaaccgcggc
ggaatgattatcattgagtcgcccgacggagtgccactccagcgcctccccaacgtgccc
tatggcgcccgtttgcgcgtcgtagatggccaagaagtcaagcgtggcgagcggttggcc
gagtgggatcctcacttcaccccgatcctcactgaggtcagcggtagagtgcggttagtg
gatattctcctcggttcaaccatgcgtgaggagattgaccccacgactggtgcggtcagc
cgtgtgattagcgagcaccgcgaggagcgccacccatccatccagatcttggacgacaag
gacaatgtggttgctcagtatgctctgagcgccgggacgatccttgagcgcgacctcgca
gatggcaagaaagtggtcgcgggcgaaatgctcgcgcgtatcccgcgggcacacgccaag
tccaaggacatcaccggtggtctgccacgcgtcgaagaactcttcgaggcgcgcaagccc
aaggatgctgccgtgcttgctgacatcagcggcgtgctccatatccgtggcagcggccgc
ggcggccgtaaggtgacgatcaccggcgataacggtgaggagcggctctacacgattcca
atctctcgccacctcattgtgacggatggtcagcgcgtggaagccggtgacatgatcacc
gacggcacaccggccccgcatgatatccttgcgatcaaaggcgaaaaggccgtgatggag
ttcctgctgagcgaagttcaggaagtctaccggctccagaaagtctccatcaacgacaag
cacattgaatgcatcatccgtcagatgctcaagaaagtcgtggtggaagaggtcggtaac
acccgcttcctctacggtcaacaggtggaccgcgccgagtttgaggaagagaaccgcatc
acggtcgagatgggtggaacaccggcaaaagcccgacccaagctgctcggcatcaccaag
gcctcgctcgagaccgagtccttcatttcggctgcgagcttccaagaaaccgcacgggtg
ttggccgatgcagccgtccgtgggcgcattgaccatctgcgtgggctcaaagaaaatgtg
atcatggggcttctcatcccagcaggaacgggcttagtgaagtaccgcaatatcgaagtt
cgcccagtcgcacaggcacaacttgaagtcgctggcgaatcttctcaggagtccgctgga
gcctaa
DBGET
integrated database retrieval system
