Sphingomonas changnyeongensis: GVO57_00160
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Entry
GVO57_00160 CDS
T07798
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GVO57_00160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schy03021
]
GVO57_00160
03400 DNA repair and recombination proteins [BR:
schy03400
]
GVO57_00160
Enzymes [BR:
schy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GVO57_00160
Transcription machinery [BR:
schy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GVO57_00160
DNA repair and recombination proteins [BR:
schy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GVO57_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
TmoB
HHH_XRCC3_RpoA
Phage_tube_2
IDH
Motif
Other DBs
NCBI-ProteinID:
QHL89525
UniProt:
A0A7Z2NTG3
LinkDB
All DBs
Position
complement(31570..32634)
Genome browser
AA seq
354 aa
AA seq
DB search
MAVNAKNWQELKKPTALERKQGGDPKRKGTFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLTGVREDVTDIVLNVKQIALRMQGEGPKRLQLSATGPAEVTAGMI
AVSGDIEVMNPDLVICHLDDGATLNMELTADTGKGYVPAANNRPADAPIGLIPVDALYSP
VRQVAYKVENTRVGQELDYDKLTLTVETDGTVTPEDAVAYAARILQDQLQLFVHFDDGLP
VSAPVAHGGGSLAPVETESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQDIMG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtcaacgcaaagaactggcaggaactgaagaagccgaccgcgcttgagcgcaag
cagggcggcgacccgaagcgcaagggcacgttcgtcgccgagccgctggagcgcggcttc
ggtctgacgctcggcaacgctctgcggcgcgtgctgctgtcgtcgctgcagggcgcggca
gtcacctcgatcaagatcgagaatgtgctgcacgaattctcgtcgctcacgggcgtgcgc
gaagacgtgaccgatatcgtgctcaatgtgaagcagatcgcgctccggatgcagggcgaa
ggcccgaagcggctgcagctgtcggcgaccggcccggccgaagtcaccgccggcatgatc
gcggtgtcgggcgacatcgaggtgatgaaccccgatctggtcatctgccatctggacgat
ggcgcgacgctgaacatggaactgaccgcggacaccggcaagggctatgtcccggccgcc
aacaaccgcccggcggacgcgccgatcggcctgatcccggtcgatgcgctttactcgccg
gtccgtcaggtcgcctacaaggtggaaaacacccgcgtcggccaggaactggactatgac
aagctgacgctcaccgtcgaaaccgacggcaccgtgacgccggaagacgccgtcgcctat
gcggcgcgcatccttcaggaccagctgcagctgttcgtccatttcgacgacggcctgccg
gtgtcggcgccggtcgcccatggcggcggcagcctggccccggtcgagaccgaaagcgac
gccaaccagctcaaccgttacctgctcaagaaggtcgacgagctggaactgtcggtgcgt
tcggccaactgcctgaagaacgacaacatcatctatatcggcgatctggttcagaagacc
gaggcggaaatgctccgcacgccgaacttcggccgcaagagcctgaacgagatcaaggaa
gtgctgtcgtcgatggggctgcgcctgggcatggaaatccccggctggccgcctgaaaac
atcgaggaaatggccaagaagctcgaacaggacatcatgggctga
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