KEGG   Sphingomonas changnyeongensis: GVO57_03060
Entry
GVO57_03060       CDS       T07798                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
schy  Sphingomonas changnyeongensis
Pathway
schy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:schy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GVO57_03060 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:schy03400]
    GVO57_03060 (uvrB)
DNA repair and recombination proteins [BR:schy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GVO57_03060 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GVO57_03060 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H DUF87 AAA_22 AAA_16 AAA_33 SWI2_SNF2 SRP54 TrwB_AAD_bind Microtub_bd
Other DBs
NCBI-ProteinID: QHL89993
UniProt: A0A7Z2NUE6
LinkDB
Position
complement(597311..599512)
AA seq 733 aa
MAIQIRTTLDEPETGQAFVPHRPARPEKSEGGRPFRLVSDYAPAGDQPQAIAELVAAAEA
RERDQVLLGVTGSGKTFTMAKVVEQLQRPALVLAPNKILAAQLYGEFKSFFPENAVEYFV
SYYDYYQPEAYVPRTDTYIEKESSINEAIDRMRHSATRALLERDDVLIVASVSCLYGIGS
VETYSAMTFALRKGQGADQAEIVRKLVALQYKRNDAAFARGAFRVRGDTVELFPSHYEDT
AWRITFFGDEIEEIVEFDPLTGKKVAALDYVKIYANSHYVTPGPTLKQATEAIRHELAER
LKELVAEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHVTIGQINGMSRGDHRRKLTLAEYGFRLPSAIDNRPLRFNEWEAMRPQTV
YVSATPGGWEMEQTGGAFVEQVIRPTGLIDPPVEIRPVEDQVDDLVNECRIVAQQGYRAL
VTTLTKRMAEDLTEYLHEAGLKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVILYADSITGSMERAMRETER
RRAKQIAYNEAHGITPQTVRRNIGDVIAHIAAKDSVLVEIGDEDAPRHLVGHNLRAYIEE
LEKKMRDAAANLEFEEAARIRDEIRQLEQAELGLPADEHKAPVMGRSNEGKPGTRKTRFG
NQQQARAARRTRR
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggcgattcaaatccgcaccacgctcgacgagcccgagaccggccaggcctttgtcccg
caccgcccggcgcggccggaaaaatccgaaggcggccgcccgttccggctggtgtcggac
tatgcgccggccggcgaccagccccaggcgattgccgagctggtggcggcggcagaggcg
cgcgaacgcgatcaggtgctgctgggcgtcaccggatcgggcaagacgttcaccatggcc
aaggtggttgaacagctgcagcgcccggcgctggtgctggcgcccaacaagatccttgcc
gcgcagctttacggcgagttcaagtcgttctttcccgaaaacgccgtcgaatatttcgtc
agctattacgactattatcagcccgaggcctatgtgccgcggaccgatacctatatcgag
aaggaaagctcgatcaacgaggcgatcgaccggatgcgtcattcggccacccgggcgctt
ttggaacgcgacgatgtgctgatcgtcgcgtcggtgtcgtgtctctacggcatcggctcg
gtcgaaacctattcggcgatgacctttgcgctgcgcaaggggcagggggccgaccaggcc
gagatcgtccgcaagctcgtcgcgctgcagtacaagcgcaacgacgccgcctttgcgcgc
ggcgcgttccgtgtgcgcggcgacacggtcgagctgtttccctcgcattatgaagacacg
gcctggcgcatcacctttttcggcgatgagatcgaggagattgtcgagttcgatccgctg
accggcaagaaggtcgccgcgctcgattatgtgaagatctacgccaactcgcattacgtc
acccccggcccgacgctcaaacaggcgaccgaggcgatccgccacgaactggccgagcgg
ctgaaggagctggtcgccgagggcaagctgctcgaggcgcagcggctggagcagcgcacc
aatttcgatctggagatgatcgccgccaccggatcctgtgcggggatcgagaattacagc
cgcttcctgaccggccgtctgcccggcgaaccgccgccgaccctgttcgaatatctgcct
gaaaacgcgctgctgttcgtcgatgaaagccatgtcaccatcggccagatcaacgggatg
agccggggcgaccatcgccgcaagctgacgctggccgaatatggcttccgcctgccctcg
gcgatcgacaaccggccgctgcgcttcaacgaatgggaggcgatgcggccgcagaccgtc
tatgtgtcggccacgcccggcggctgggaaatggaacagaccggcggcgcgttcgtcgaa
caggtgatccgcccgaccgggctgatcgacccgccggtcgagatccggccggtcgaggat
caggtcgacgatctggtcaatgaatgccggatcgtcgcgcagcagggctatcgcgcgctg
gtgacgacgctcaccaagcggatggccgaggatctgaccgaatatctgcacgaagcgggg
ctgaaggtccgctacatgcattccgacgtcgagacgctggagcgcatcgagctgatccgc
gacctgaggctcggcgtctatgacgtgctggtcggcatcaacctgctgcgcgaggggctg
gacatccccgaatgcgggctggtcgcgatcctcgatgcggacaaggaagggtttctgcgc
tccgaaacctcgctgatccagacgatcggccgcgccgcgcgcaatgccgaggggcgggtg
atcctttatgccgacagcatcaccggatcgatggagcgggcgatgcgcgagaccgagcgc
cgccgcgccaagcagatcgcctataacgaagcgcatggcatcacgccgcagacggtgcgg
cgcaacatcggcgatgtgatcgcccatatcgccgccaaggattcggtgctggtcgagatc
ggcgacgaggatgcgccccgccatctcgtcggccacaatctgcgcgcctatatcgaagag
cttgaaaagaagatgcgcgacgccgcggccaatctcgagttcgaggaggccgcgcgcatc
cgcgacgagatccgccagctcgaacaggccgaactgggcctgccggccgacgagcataag
gcgccggtcatgggccgctcgaacgagggcaagccggggacgcgcaagacccggttcggc
aaccagcaacaggcgcgcgccgcccgccgcacccgccgctga

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