Sphingomonas changnyeongensis: GVO57_03380
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Entry
GVO57_03380 CDS
T07798
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GVO57_03380 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schy03021
]
GVO57_03380 (rho)
03019 Messenger RNA biogenesis [BR:
schy03019
]
GVO57_03380 (rho)
Transcription machinery [BR:
schy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GVO57_03380 (rho)
Messenger RNA biogenesis [BR:
schy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GVO57_03380 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
NACHT
S1CSD-TOTE-2
Spore_III_AA
Fungal_virus_P2_C
AAA_25
AAA
AAA_14
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QHL90044
UniProt:
A0A7Z2S8Q1
LinkDB
All DBs
Position
complement(655575..656831)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKDLKKKSPAELVEMAERLGVEGASTLRKQDLMFAILKAEAENGVQIMGEGTIEVLPD
GFGFLRSPEANYLAGPDDIYVSPNQVRKYGLRTGDTVEGEVRGPKDGERYFALTRLVAVN
FDDPEVVRHRVNFDNLTPLYPEQKLKLDLGDPTVKDKSARVIDIIAPQGKGQRALIVAPP
RVGKTVLLQNIARSITANHPEVFLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAMDV
GKSGTRKEELLVDKSTLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFDSMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaaggatctgaagaaaaaatcgccggccgaattggtcgaaatggccgagcgg
ctgggcgtcgaaggggcgtcgacgctgcgcaaacaggatctgatgttcgccatcctgaag
gccgaggccgaaaatggcgtccagatcatgggcgagggcacgatcgaggtgctgcccgac
ggcttcggctttctgcgcagcccggaggccaactacctcgccggtcccgacgacatttat
gtgtcgcccaaccaggtgcgcaaatacggcctgcgcaccggtgacacggtcgagggcgag
gtgcgcggacccaaggatggcgagcgttatttcgcgctcacccggctggtcgcggtgaac
ttcgacgatcccgaggtggtgcgccaccgggtcaatttcgacaatctgaccccgctctat
cccgaacagaagctgaagctcgacctgggcgatccgacggtcaaggataagtcggcgcgg
gtgatcgacatcatcgcgccgcagggcaagggccagcgcgcgctgatcgtcgcgccgccg
cgcgtcggcaagacggtgctgctccagaacatcgcccgctcgatcaccgccaaccatccc
gaagtgttcctgatcgtgctgctgatcgacgagcggcccgaggaagtgaccgacatgcag
cggtcggtgaagggcgaggtgatcagctcgaccttcgacgaaccggcgtcgcgccatgtg
caggtcgccgaaatggtgatcgaaaaggccaagcgcctggtcgagcacaaaaaggacgtg
gtgatcctgctcgattcgatcacccgtctgggccgcgcctacaacactgtcgtgcccagc
tcgggcaaggtgctgaccggcggcgtcgatgccaatgcgctgcagcggccgaagcgtttc
ttcggtgcggcgcgcaacatcgaggaaggcgggtcgctgtcgatcatcgccaccgcgctg
atcgataccggcagccgcatggacgaggtgatcttcgaagagttcaagggcaccggcaac
tcggaaatcgtccttgaccgcaaggtcgccgacaagcgcatcttcccggcgatggacgtc
ggcaaatccggcacccgcaaggaagagctgctggtcgacaagtcgacgctcagcaagatg
tgggtgctgcgccgcatcctgatgcagatgggcacggtcgacgcgatggagttcctgctc
gacaagatgaaggattcgaagaccaacgaggatttcttcgattcgatgaaccagtaa
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