Sphingomonas changnyeongensis: GVO57_04095
Help
Entry
GVO57_04095 CDS
T07798
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy02020
Two-component system
schy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GVO57_04095
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GVO57_04095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schy03021
]
GVO57_04095
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
schy02035
]
GVO57_04095
Transcription machinery [BR:
schy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GVO57_04095
Bacterial motility proteins [BR:
schy02035
]
Flagellar system
Flagellar assembly proteins
Stator
GVO57_04095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r3
HTH_23
UPF0122
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
QHL90164
UniProt:
A0A7Z2S8U0
LinkDB
All DBs
Position
791279..792010
Genome browser
AA seq
243 aa
AA seq
DB search
MATAPMMPLVYDRPGQPAGSEAMIRAHMPLVRRIAWHVHGSVSNAVEVEDLIQTGLVALV
EAAASFEDRGQVTFAQYLATRIRGAMIDALRRQATLTRGAMRRRRALAEAEAALAAAHGR
PATEAELAERLGVTRDRLRTDYLDARPVRMEPIDGVYSDDSPWFMSDEPDPFATLEQEDL
HRALTAAIATLSEREAQVIQLYYVEELNLEEIGQVLGVGAARICQIKKAAHQKLRHALAR
QTG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcccccatgatgccgcttgtctatgaccgtcccggccagcccgccggcagc
gaggcgatgatccgcgcgcatatgccgctggttcgccgcatcgcctggcatgtccatggt
tcggtgtcgaatgcggtcgaggtcgaggatctgatccagaccggccttgtcgcgctggtc
gaggccgccgcgagcttcgaggatcgcggccaggtgaccttcgcccagtatctcgcgacc
cgcatccgcggcgcgatgatcgatgcgctgcgccgccaggcgacgctgacccggggcgcg
atgcgccggcggcgggcgctggccgaggcggaggcggcgcttgccgccgcgcatggccgc
ccggcgaccgaggccgagctggccgagcggctgggcgtgacgcgcgaccggctgcgcacc
gactatctcgacgcgcggccggtgcggatggagccgatcgacggcgtctattccgatgac
agcccgtggttcatgagcgacgagcccgatccgttcgccacgctggagcaggaggatctg
caccgcgcgctgaccgccgcgatcgcaaccctgtcggagcgcgaggcgcaggtgatccag
ctttattatgtcgaggagctgaatctggaggaaatcggccaggtgctgggcgtcggcgcg
gcgcggatctgccagatcaaaaaggccgcccaccagaagctgaggcacgcgctcgcccgc
cagaccggctga
DBGET
integrated database retrieval system
