Sphingomonas changnyeongensis: GVO57_04225
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Entry
GVO57_04225 CDS
T07798
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy03030
DNA replication
schy03410
Base excision repair
schy03420
Nucleotide excision repair
schy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GVO57_04225 (polA)
03410 Base excision repair
GVO57_04225 (polA)
03420 Nucleotide excision repair
GVO57_04225 (polA)
03440 Homologous recombination
GVO57_04225 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schy03032
]
GVO57_04225 (polA)
03400 DNA repair and recombination proteins [BR:
schy03400
]
GVO57_04225 (polA)
Enzymes [BR:
schy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GVO57_04225 (polA)
DNA replication proteins [BR:
schy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GVO57_04225 (polA)
DNA repair and recombination proteins [BR:
schy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GVO57_04225 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GVO57_04225 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DprA_N
HHH_5
HHH
IMS_HHH
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QHL91780
UniProt:
A0A7Z2NYK8
LinkDB
All DBs
Position
816652..819396
Genome browser
AA seq
914 aa
AA seq
DB search
MPHLYLVDGSGYIFRAYHRLPPLTNRHGEPVGAVYGYTTMLWKLADALHKADGPTHMAVI
LDASGESFRHGMYDAYKANRPPPPEDLVPQFPMIREATRAFSLPCIEETGLEADDLIASY
ARAALAQGWSVTIVSSDKDLMQLIQPGLDLLDTMNNRRLGDADVVEKFGVPPHQLGEVLA
LMGDSVDNVPGVPGIGPKTAAKLIQEHGDVEAVLAAAPGMKPGRLRDNLIEHADAARLSR
ELVRLKDDAALAQPLDALALKGIPEGPLRAFLEHHGFRSLLARLESVTDAVTPSGVSPAL
PDDPPCDHGAYETVLDPAALDRWIAEARAQGHVAIDTETDSRDAFHARLVGVSLALAPNR
ACYIPLGHGGGDLLGADFPAQIPLADALDRLRPLLADDSVMKIGHNLKFDMVVLARHGIA
VRPFDDTILMSFDLDAGLGGHGMDELAETHLQHRCISFKDVTGSGKKALGFHQVDLATAT
RYAAEDADVTLRLWRRFSPRLAAEAATRVYQMVDRPLVPVIAAMERAGIKVDRARLAALS
RDFAQSIAGIEADVFALAGQSFAIGSPKQLGEILFEKMGLKGGRRGKTGIYSTDVTELER
LAGDGVEIARRVLDWRQLSKLKSTYTDALQDSISPEDGRVHTSYSLTGAQTGRLSSTEPN
LQNIPIRTEVGRQIREAFVAEPGHVLLAADYSQIELRLAAHMADVPALKAAFAEGQDIHA
LTATELFGHVDRDTRGRAKTINFAILYGISRWGLAGRLGVTPDEAQAMIDRYFDRFPGIS
RYIADTLTSARACGYTTTLFGRKTHFPRLSSKNQAERQGSERAAINAPIQGTSADIIKRA
MVRMQPALDAAGLSGVRMLLQVHDELVFEVPESDVEAASAVIRRVMESAAEPAVPLSVPL
AVEIGHGPSWGAAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgccccatctctatctggtcgacggctccggctacatcttccgcgcctatcaccggctg
ccgccgctcaccaaccgtcatggcgagccggtgggcgccgtctatggctataccacgatg
ctgtggaagctcgccgacgcgctccacaaggccgacggcccgacgcacatggcggtgatc
ctcgacgcgagcggcgaatcgttccgccacggcatgtatgatgcctacaaggccaaccgg
ccgccgccgccagaggatctggtgccgcagtttccgatgatccgcgaggcgacgcgcgct
ttctcgctgccctgtatcgaggaaaccgggctggaggccgatgatctgatcgccagctat
gcccgcgccgcgctggctcagggctggtcggtcaccatcgtgtcgtccgacaaggatctg
atgcagctgatccagccgggtctcgacctgctcgacacgatgaacaaccgccggctgggc
gatgccgatgtggtggagaaattcggcgtgcccccgcaccagctgggcgaggtgctggcg
ctgatgggcgacagtgtcgacaatgtccccggcgtccccggcatcggccccaagaccgcc
gccaagctgatccaggagcatggcgatgtcgaggcggtgctcgccgccgcgccggggatg
aagcctgggcggctgcgcgacaatctgatcgaacatgccgatgccgcgcgcctgtcgcgc
gagctggtgcggctgaaggacgatgccgcgctcgcccagccgctcgacgcgctggcgctc
aagggcattcccgaggggccgctgcgtgcgtttctggagcatcacggttttcgctcgctg
ctggcgcggctggaaagcgtcaccgacgcggtcaccccgtccggggtcagcccggcgctg
cccgatgatccgccctgcgatcacggcgcctatgaaaccgtgctcgatcccgccgcgctc
gaccgctggatcgcggaggcgcgcgcgcaggggcatgtcgccatcgacaccgaaaccgac
agccgcgatgcgtttcacgcccggctggtcggggtcagccttgcgctcgcccccaaccgc
gcctgctatattccccttggccatggcggcggcgatctgctgggcgcggattttcccgcc
cagatcccgcttgccgatgcgctcgaccggctgcggccgctgcttgccgacgacagcgtt
atgaagatcggccacaatctcaagttcgacatggtcgtgctcgcccgccacgggatcgcg
gtgcggccgtttgacgacaccatcctgatgagcttcgatctcgatgccgggcttggcggg
catggcatggacgagctggccgagacgcatctccagcaccgctgcatcagcttcaaggac
gtgaccggcagcggcaaaaaggcgctcggcttccatcaggtcgatctggcgacggcgacc
cgctatgccgccgaggatgccgatgtcacgctcaggctgtggcggcgcttcagcccgcgg
ctggcggcggaggcggcgacgcgcgtctatcagatggtcgaccggccgttggtgccggtg
attgcggcgatggagcgggcggggatcaaggtcgatcgtgcgcgccttgccgcgctgtcg
cgcgatttcgcccagtcgatcgcggggatcgaggcggatgtgttcgcgctggccgggcag
agctttgcgatcggcagccccaagcagctgggcgagatcctgtttgaaaaaatgggcctg
aagggcgggcggcgcggcaagaccggcatctattcgaccgatgtgaccgagctggagcgg
ctggccggtgacggggtcgaaatcgcccgccgggtgctcgactggcggcagctgtccaag
ctcaaatcgacctataccgatgcgctgcaggactcgatcagccccgaggacgggcgcgtc
cacacctcctattcgctgaccggggcgcagaccgggcggctgtcctcgaccgagcccaat
ctgcagaacatcccgatccgcaccgaggtcggccgccagatccgcgaggcgttcgtggcc
gagccgggtcatgtgctgctggccgccgattacagccagatcgagctgcggttggccgcg
cacatggccgatgtgccggcgctcaaggccgcctttgccgaggggcaggacattcatgcg
ctgaccgcgaccgagctgttcggtcatgtcgaccgcgacacgcgcggccgggccaagacg
atcaactttgccatcctctacggcatttcgcgctgggggctggccgggcggctgggggtg
acgcccgacgaggcgcaggcgatgatcgaccgttatttcgatcgttttcccggcatcagc
cgctatatcgccgacacgctgaccagcgcgcgcgcctgcggctatacgacgacgctgttc
gggcggaagacgcatttcccgcgcctgtcgtcgaagaaccaggccgagcgccagggatcg
gagcgcgcggcgatcaacgcgcccatccagggcacgagcgccgacatcatcaagcgcgcg
atggtgcggatgcagccggcgctcgacgccgccggcctgagcggcgtgcgcatgctgctg
caggtgcatgacgagctggtgttcgaggtgcccgaaagcgatgtggaggcagcatcggcg
gtcatccgccgggtgatggaaagcgccgccgaaccggcggtgccgctcagcgttccgctc
gcggtcgagatcgggcatgggccgagctggggcgctgcgcattag
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