Sphingomonas changnyeongensis: GVO57_04565
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Entry
GVO57_04565 CDS
T07798
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy03410
Base excision repair
schy03430
Mismatch repair
schy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GVO57_04565 (recJ)
03430 Mismatch repair
GVO57_04565 (recJ)
03440 Homologous recombination
GVO57_04565 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schy03400
]
GVO57_04565 (recJ)
DNA repair and recombination proteins [BR:
schy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GVO57_04565 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GVO57_04565 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GVO57_04565 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QHL91787
UniProt:
A0A7Z2NYK5
LinkDB
All DBs
Position
complement(896996..898777)
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AA seq
593 aa
AA seq
DB search
MTALPPSALPPALGVTRSVLGQPWHWRGAPTDGIDRDLRPDDLVTQLLMTRGCPRDAVPI
YRAPTIRAFMPDPSIFRDMDRAAARLADAVERGEAVTVFGDYDVDGATSAALLIRLLAGL
GLSPAAYIPDRLMEGYGPSGEALVRIAESGTRLIVTVDCGAQAFEALAMARAAGAEVIVV
DHHKCSSALPEAYALVNPNRLDEDEGAAHGHLAAVGVAFLLGAALLRELRGRGHFRTRPE
PRLIDLLDLVALGTVADVAALKGLNRAFVAQGLKVMAAGRNIGLTALARAARLSRAPLTH
DLGFALGPRINAGGRVGRSDLGVRLLTTSDPDEAARIAAELDALNEERRAIEAEVQQAAE
AAARSDDAVQIVAGAGWHPGVIGIVAGRLKERLGRPAIVIGIDEAGIGKGSGRSVAGVDL
GAAVMAARDSGLLVAGGGHAMAAGLTVTADRVDSLRDFLNERLGDAVAAATASRALAIDA
VVSPRGLSPSLIEALDEAGPYGMGWPAPRVATGPVRIVRADIVGSGHVRTILAGEDGARV
KAVAFRAADTDLGQALLGAPADRRLWLAGRAKTDDWGTRPAAEMHIDDAAWVE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacagccctgccgccttccgctctccccccggccctgggggtgacccgttcggtgctg
ggccagccctggcactggcgcggcgcgcccaccgacgggatcgaccgcgatctcaggccc
gatgatctggtcacgcagctgctgatgacgcgcggctgcccgcgcgacgcggtgccgatc
taccgcgcgccgacgatccgcgcgttcatgcccgatccgtcgatcttccgcgacatggac
cgggcggccgcgcggctggccgatgcggtcgagcgcggcgaggcggtgacggtgttcggc
gattatgatgtcgatggcgcaacctcggccgcgctgctgatccgcctgctcgccgggctc
ggcctgtcgcccgccgcctatatccccgaccggctgatggaaggctatggcccaagcggc
gaggcgctggtcaggatcgcggagagcggcacgcggctgatcgtcaccgtcgattgcggc
gctcaggcgttcgaggcgctcgccatggcccgcgcggcgggggcagaggtgatcgtcgtt
gatcatcacaaatgctcaagcgcgcttcccgaggcctatgcgctcgtcaatcccaaccgg
ctcgacgaggatgagggcgcggcgcatggccatctggcggcggtcggcgtcgcctttctg
ctgggtgcggcgctgctgcgcgagctgcgcggacgcggccatttccgcacccggcccgaa
ccccggctgatcgacctgctcgatctggtcgcgctcggcacggttgccgatgtggcggcg
ctcaagggcctcaaccgcgcctttgtcgcccaggggctgaaggtgatggcggcgggccgc
aatatcgggctgaccgcgctcgcccgcgccgcgcggctgtcgcgcgcgccgctcacccat
gatctgggctttgcgctcggcccgcgcatcaatgccggcgggcgggtcgggcggtcggac
ctgggggtcaggctgctgaccaccagcgaccctgacgaggccgcccgaatcgccgccgag
ctcgacgcgctgaacgaagaacgccgcgcgatcgaggccgaggtccagcaggcggccgaa
gcggcggcgcgcagcgacgatgccgtgcagatcgttgcaggcgcgggctggcatccgggg
gtgatcggcatcgtcgccgggcggctgaaggaacggctgggccggccggcaatcgtgatc
ggcatcgacgaggccgggatcggcaagggatcgggccggtcggtcgcgggtgtcgatctg
ggcgcggcggtgatggccgcgcgcgattcggggctgctggtcgcgggcggcggccatgca
atggcggcggggctgacggtaacggccgaccgggtcgattcgctgcgcgatttcctcaac
gaacggctgggcgatgcggtggcggcggccacggcgtcgcgcgcgcttgccatcgatgcc
gtggtcagcccgcgcggcctgtcgccaagcctgatcgaggcgctcgacgaggccgggcct
tacggcatgggctggcccgcgccgcgcgtcgcgaccgggccggtcaggatcgtgcgcgcc
gatattgtcggcagcggccatgtgcgcacgattctggccggcgaggacggtgcgcgggtg
aaggccgtcgccttccgcgccgccgacaccgatctgggtcaggcgctgctcggcgcgcct
gcggaccggcggctgtggctggccggacgggccaaaaccgatgattggggcacccggccg
gcagcagaaatgcatattgatgacgcagcatgggttgagtga
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