Sphingomonas changnyeongensis: GVO57_05485
Help
Entry
GVO57_05485 CDS
T07798
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GVO57_05485 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schy03400
]
GVO57_05485 (xth)
Enzymes [BR:
schy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GVO57_05485 (xth)
DNA repair and recombination proteins [BR:
schy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GVO57_05485 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QHL90390
UniProt:
A0A7Z2S4T0
LinkDB
All DBs
Position
1092810..1093583
Genome browser
AA seq
257 aa
AA seq
DB search
MRIATYNVNGIKARLPRLLEWLEEQRPDIACLQELKSSDDTFPEAEIRAAGYGAVWHGQK
GFNGVAVLARGRDPVERQRGLPGDPDDSHSRYLEAEVDGLVVASIYLPNGNPVPGPKFDY
KLAWMDRLIAHARTLLAEEVPVVLAGDYNVIPTDADVYSPAAMADDALMQPQSRAALRRL
VHQGWTDALRARHPVGPLWTFWDYQAGAWARDAGFRIDHLLLSPQAADRLADAGVDRAYR
GREKASDHAPVWAVIAD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgacctataatgtgaacgggatcaaggcccggctgccccggctgctcgaa
tggctggaggagcagcggcccgacatcgcctgtctgcaggagctgaagtcgagcgacgac
acctttcccgaggccgagatccgcgccgccggctatggcgcggtgtggcacgggcaaaag
gggttcaacggcgtcgccgtgctggcgcgcgggcgcgatcccgtcgagcggcagcgcggc
ctgcccggcgatccggacgacagccacagccgctatctggaggcggaggttgacgggctg
gtcgtcgcctcaatctatctgcccaacggcaatccggtgccggggccgaagttcgattac
aagcttgcctggatggaccggctgatcgcccatgcccgcactctgctggccgaagaggtg
ccggtggtgctcgcgggcgattacaatgtcatcccgaccgatgccgatgtctattcgccc
gctgcgatggccgatgatgcgctgatgcagccgcagagccgcgcggcgctccggcggctg
gtgcatcagggctggaccgatgcgctgcgcgcccgccatccggtcggcccgctctggacc
ttctgggactatcaggccggggcctgggcgcgcgatgcgggttttcgcatcgatcatctg
ctgctcagcccgcaggcggccgaccggctggccgatgccggtgtcgaccgcgcctatcgc
gggcgtgaaaaggccagcgaccatgcgccggtctgggcggtgatcgcggactga
DBGET
integrated database retrieval system
