KEGG   Sphingomonas changnyeongensis: GVO57_07100
Entry
GVO57_07100       CDS       T07798                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
schy  Sphingomonas changnyeongensis
Pathway
schy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:schy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GVO57_07100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:schy03019]
    GVO57_07100
Messenger RNA biogenesis [BR:schy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GVO57_07100
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL RNase_J_C Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QHL90640
UniProt: A0A7Z2NWH9
LinkDB
Position
1436438..1438078
AA seq 546 aa
MTPGNELLFLALGGSGEIGMNVNLYGTQGKWVMVDCGITFADPGYPGIDVILPDLAFIEE
RLGDLLGIVLTHGHEDHIGALPYLAADLGVPLYATPFTAGLIRGKLEEEGVADQVRLHVI
DREHGRFELGPFSFDYVPLAHSIPEGNALVIGTPYGRIFHTGDWKLDDAPMLGTPSTAEE
LRAIGDAGVLALVCDSTNVFNEEASGSEGAVRAGLDQAIRGAEGRVLVTTFASNAARLAT
LADVARDTGRRICVAGRSLDRILKVARSVGYLRDFPETVDFDAAMKLPPREVMIIATGGQ
GEARAALGRIAFDQHPIKLDAGDLVVFSSKQIPGNEIAIGRIQNALAARGIRMITDRQAH
VHVSGHPGRPELEAMYEWIRPEIILPVHGERRHMAEQARFALEQGVPRAIVQENGQMVRL
APDGPAIIGHERAGRLMLDGDVILPADGATMQERRRIASYGQISVALALNASGRLVGEPQ
VRVQGVPVEEDKDDFLIEAADAAGEAARAAPRELEKLREAVRLAVRRKAVEWTGKKPIVD
VLVITL
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgacccccggcaacgaacttcttttcctcgcgcttggcggctcgggcgaaatcggcatg
aacgtcaatctctacggcacccagggcaaatgggtgatggtggattgcggcatcaccttc
gccgatcccggctatcccggcatcgatgtgatcctgcccgatctggcgttcatcgaggaa
cggctgggcgatctgctcggcatcgtgctcacccatggccatgaggatcatatcggcgcg
ctgccctatctggccgccgatctgggcgtcccgctctatgcgacgccgttcaccgccggg
ctgatccggggcaagctcgaggaagagggggtggccgatcaggtgcggctgcacgtcatc
gatcgtgagcatggccggttcgaactggggccgttctcgttcgactatgtgccgctcgcc
cattcgatccccgagggcaatgcgctggtgatcggcacgccctatgggcgcatcttccat
accggcgactggaagctcgatgatgcgccgatgctcggcacgccgtcgaccgcggaggaa
ctgcgcgccatcggcgatgcgggtgtgctcgcgctcgtctgcgattcgaccaatgtgttc
aacgaggaggcgtccggctccgaaggcgcggtgcgcgccgggctggatcaggcgatccgc
ggtgccgaggggcgggtgctggtcaccacctttgcatcgaacgccgcgcggctggcgacg
ctcgccgatgtcgcgcgcgacaccgggcggcgcatctgcgtggccgggcggtcgctcgac
cgcatcctgaaggtcgctcgctcggtcggctatctgcgcgattttcccgaaacggtcgat
ttcgacgccgcgatgaagctgcccccgcgcgaggtgatgatcatcgcgaccggcgggcag
ggcgaggcgcgggcggcgcttggccgcatcgccttcgaccagcacccgatcaagctcgat
gccggcgatctggtggtgttttcatcgaagcagatcccgggcaatgaaatcgcgatcggc
cgcatccagaatgcgctcgccgcgcgcgggatccggatgatcaccgaccgtcaggcgcat
gtccatgtctccggccatccgggccggcccgagctcgaggcgatgtatgaatggatccgg
ccggagatcatcctgcccgtccatggcgagcgccgccacatggccgaacaggcgcgtttt
gcgctcgaacagggcgtgccgcgcgcgatcgtgcaggaaaatggccagatggtgcgtctg
gccccggacgggccggcgatcatcggccatgagcgcgcgggccggctgatgcttgacggc
gatgtgatcctgcccgccgatggcgcgacgatgcaggagcggcggcggatcgcctcttac
ggccagatttcggtcgcgcttgcgctcaatgccagcgggcgtcttgtcggtgagccgcag
gtgcgcgtgcagggcgtgccggtcgaggaagacaaggatgatttcctgatcgaggccgcc
gatgcggcgggcgaggccgcgcgcgccgcgccccgcgagctggagaagctgcgcgaggcg
gtgcggctcgcggtgcggcgcaaggcggtcgaatggaccggcaagaagccgatcgtcgat
gtgctggtgatcacgctctga

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