Sphingomonas changnyeongensis: GVO57_11895
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Entry
GVO57_11895 CDS
T07798
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
schy
Sphingomonas changnyeongensis
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schy03400
]
GVO57_11895
Enzymes [BR:
schy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GVO57_11895
DNA repair and recombination proteins [BR:
schy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GVO57_11895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QHL91384
UniProt:
A0A7Z2NY38
LinkDB
All DBs
Position
complement(2413837..2416788)
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AA seq
983 aa
AA seq
DB search
MTPASARANHPGVRPQVFTIPPHRSFADALVAGVMARHGGDPLALAQGVILTPNSRAARA
ITDAFVRRAEGGLLLPRLVPVGDIDLDERLGALLDPIGSVEPVPPAIDPLQRQLILARLI
VEAERRAGGAPGAAEAMRLAAELGRTLDQLHVERIDPARLAALDPGDQLSAHWARSLILF
ELVLTRWPAELARLGRIDLADRRNRLLDRAARRWRELPPPGFVIAAGISTAAPAVAALLR
TIALSPRGAVVFDALDIAMPRDEWDSLGPHDPDPDTGVRPRAIETHPQYHLKLLLDRMGI
GRDEVVRWRWGGGHAARAGRSRLISNALAPAEATVKWTGLAAKDRDRAGIRLLEVATPAE
EAQAIAIALREALETPERTAALVTPDRGLAQRVVAHLRRWGIEADDSAGQPLSRTPPGTL
LRAIIEAAVEDFAPTALLALLKHPLVRAGEGRAAWLDRVRALDLRLRGPRPAPGLAALGL
DAEMTALLAPLAEALAGPLSLGAVVAAVRETADRLAGDAAWARPAGRAAADLLARIEDHA
AAGPAAITRDALAPLLADLMDAVAVRPPQGGHPRIFIWGLIEARLQQADLMVLGGLNEGV
WPAAPPPDPWLAPRIRADLGLPGLETRIGLAAHGFAGAMGAPQLLITRAARDARGPAVAS
RLWLRLEALTGGLPRAGHLAGWAARLDRPDRVQPAARPAPRPPVAARPRALSVTDLDRLK
ADPFAFYAQAMLRLRRIEPVDAEPSPAWRGTMVHDVLEKWSLEDGGDPARLHGRAQAMLA
ALGAHPLLRALWQPRLMAAIDWIAATMTAQMAEGRQVIAVEARGQIEIAGITLSGRADRI
DRLAGGGLAIIDYKTGAAPNGRTVSAGFAQQLGLIGLMAERGGFDGIEGQALAFDYWSLA
RNKQGGFGAISSPVDPAGKYGRVRNDAFVAHAAHQLADAVGRWLTGDDAFTAKLHPERAP
YGDYDQLMRLDEWYGRDSGEGAA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggcgtctgcccgcgctaaccatccgggcgtgcgcccgcaggtcttcaccatc
cccccgcaccggtcgttcgccgacgcgcttgtcgcgggggtgatggcgcgccatggcggc
gatccgctggcgctggcccagggggtgatcctgacgcccaacagccgcgccgcgcgtgcg
atcaccgacgcatttgtgcgccgcgccgaaggcgggctgctgctgccccggctggtcccg
gtcggcgatatcgaccttgatgagcggctgggcgcgctgctcgatccgatcgggtcggtc
gagccggtgccgccggccattgatccgctgcagcgccagctgatccttgcccggctgatc
gtcgaggcggagcggcgggcgggcggcgcgcccggcgctgccgaggcgatgcggctggcg
gcagagcttggccgcacgcttgaccagctgcatgtcgaacggatcgatcccgcccggctg
gcggcgctcgatcccggcgaccagctttcggcgcattgggcgcggtcgctgatcctgttc
gaactggtgctcacccgctggccggcggaactggcgcggctggggcggatcgacctggcc
gaccggcgcaaccggctgctcgaccgcgcggcgcggcgctggcgcgagctgccgccgccg
ggctttgtcatcgccgcaggcatttcgaccgccgccccggcggttgccgcattgctgcgc
accatcgccctgtcgccgcgcggcgcggtggtgttcgacgcgctcgacatcgcgatgccg
cgcgatgaatgggattcgcttggcccgcatgatcccgatcccgacaccggcgtgcggccg
cgcgccatcgagacgcatccccaatatcatctgaagctgctgctcgaccggatgggcatt
ggccgggatgaggtggtgcgctggcgctggggcggcggccatgccgcgcgcgccgggcgc
agccgcctgatctcgaacgcgctcgcccccgccgaggcgacggtcaaatggaccgggctt
gccgccaaggaccgcgaccgggcgggcatccgcctgctcgaggtcgcgaccccggcggag
gaggcgcaggcgatcgcgatcgcgctgcgcgaggcgctggagacgcctgagcggacggcg
gcgctggtgacgcccgaccgggggctcgcgcagcgcgtggtcgcccatctccggcgctgg
gggatcgaggccgatgattctgccgggcagccgctgtcgcgcacgccgccgggcacgctg
ctgcgcgcaatcatcgaggcggcggtcgaggatttcgcgcccaccgcgctgctggcgctg
ctcaagcatccgctggtccgcgccggggaggggcgggcggcctggctcgaccgggtgcgc
gcgctcgacctgaggctgcgcggcccgcgccccgcgccggggctggcggcgctcgggctt
gatgcggagatgaccgcgctgctcgcgccgctggccgaggcgcttgcaggcccgctgtcg
ctcggcgcagtggtggcggcggtacgcgagacggctgatcggctggccggcgatgcggcc
tgggcgcgccccgctggccgggcggcggcggatctgctcgcgcggatcgaggatcatgcc
gccgccggccccgccgcgatcacgcgcgatgcgcttgcgccgctgcttgccgatctgatg
gatgcggtcgcggtgcgcccgccccagggcggccatccgcgcatcttcatctgggggctg
atcgaggcgcggctgcaacaggccgatctgatggtgctgggcgggctgaacgagggcgtc
tggccggcggccccgccgcccgatccgtggctggcgccgcgcatccgcgccgatctgggg
ctgccggggctggagacgcggatcggccttgcggcgcacggctttgccggggcgatgggc
gcgccgcagctgctgatcacccgcgcggcgcgcgatgcgcgcggccctgccgttgcctcg
cggctgtggctgcggctggaggcgctgaccggcggcctgccgcgcgccgggcatctggcc
ggctgggcggcgcggctcgaccggcctgaccgggtgcagccggctgcccgtccggccccg
cgcccgcccgtcgccgcgcgcccgcgcgcgctgtcggtcaccgatcttgaccggctgaag
gccgatcccttcgccttttacgcgcaggcgatgctgcggctgcggcggatcgagccggtc
gatgccgaacccagccccgcctggcgcggcacgatggtgcatgacgtgctggaaaaatgg
tcgctcgaggatggcggcgatccggcgcggctgcacgggcgggcgcaggcgatgctcgcc
gcccttggcgcgcatccgctgctgcgcgcgctgtggcagccccggctgatggcggcgatc
gactggatcgccgccaccatgaccgcgcagatggccgaggggcggcaggtgatcgcggtc
gaggcgcgcggccagatcgagattgccggcatcaccctgtcgggccgcgccgaccgcatc
gaccggctggccgggggcgggctagcgatcatcgattacaagaccggggcggcgcccaat
ggccgcacggtcagcgccggtttcgcccagcagcttggcctgatcgggctgatggcggag
cgcggcgggtttgacgggattgaggggcaggcgctggcgtttgattactggtcgcttgcc
cgcaacaagcagggcgggttcggggcgatcagctcgccggtcgatccggcgggcaaatat
gggcgggtgcgcaacgacgcgttcgtcgcccatgccgcccatcagcttgccgatgcggtc
gggcgctggctgaccggcgatgatgccttcaccgccaagctgcatcccgaacgcgcgcct
tatggcgattatgaccagttgatgcggctcgacgaatggtatggccgcgacagcggcgag
ggggcggcatga
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