Sphingomonas changnyeongensis: GVO57_13905
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Entry
GVO57_13905 CDS
T07798
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GVO57_13905 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schy03019
]
GVO57_13905 (pnp)
03016 Transfer RNA biogenesis [BR:
schy03016
]
GVO57_13905 (pnp)
Enzymes [BR:
schy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GVO57_13905 (pnp)
Messenger RNA biogenesis [BR:
schy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GVO57_13905 (pnp)
Transfer RNA biogenesis [BR:
schy03016
]
Prokaryotic type
tRNA degradation factors
GVO57_13905 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_2
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
Motif
Other DBs
NCBI-ProteinID:
QHL91689
UniProt:
A0A7Z2NYC6
LinkDB
All DBs
Position
2859409..2861724
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AA seq
771 aa
AA seq
DB search
MFNKKTVEIEWGGKTLTLETGRVARQADGAVLATLGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYAAAGRIPGGFFKRERGATEKETLVSRLIDRPIRPLFPEGFYNEINCIAQVMSY
DGENEPDILAMIAASAALTLSGVPFLGPIGAARVGYKDGEYQLNPTDAEVEAGSLDLVVA
GTHDAVMMVESEAKELSEDIMLGAVMFGHREMQKVINAIIDLAEQAAKDPWDMAAQADQS
AMKAKLKALVGADIAAAYKLTNKSERAQALNDARAKAKAAFADENPQDQMAAIKLVKKLE
ADIVRQAILKEGRRIDGRNTRQVRPIEAIAGFLPRTHGSALFTRGETQTICTTTLGTKDA
EQMIDGLTGLHYQHFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPTKEEF
PYTVRVTSDITESNGSSSMATVCGGSLSLMDAGVPIKRPVSGIAMGLILEGKEFAVISDI
LGDEDHLGDMDFKVAGTSEGITSLQMDIKIAGITEEIMKVALEQAHEGRAHILGEMAKAL
GETRTELSAHAPRIETITIDKSKIRDVIGTGGKVIREIVATTGAKVDIDDEGVIKISSAD
LSQIEAAKAWILGIVEEPEIGKIYTGKVVNIVDFGAFVNFMGGRDGLVHVSEIKNERVAN
VGDVLSEGQEVKVKVLEIDNRGKVRLSMRVVDQETGAELEDTRPAKPPREDRGERGERGD
RPKRDGDRRRDGGRGGRDRGDRPRRERGEGGGREDGGEPEFAPAFLTGGDD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagaagactgtcgaaatcgagtggggcggaaagaccctgacactcgaaacg
ggccgcgttgcccgccaggctgacggcgcggtgctcgcgacgctcggcgaaaccgtggtc
ctgtgcgcggtcaccgctgccaagtcggtcaaggaggggcaggatttcttccccctgacc
gtccattaccaggaaaaatacgctgccgccgggcgcatcccgggcggcttcttcaagcgc
gaacgcggcgcgacggaaaaggagaccctggtctcgcgcctgatcgaccgtccgatccgc
ccgctgttccccgaaggtttctacaacgaaatcaactgcatcgcgcaggtgatgtcgtat
gatggcgaaaacgagcccgacattctggcgatgatcgccgcttcggctgcgctcacgctg
tcgggcgtgccgttcctcggcccgatcggcgcggcacgcgtcggctacaaggacggcgaa
tatcagctgaacccgaccgacgccgaagtcgaggccgggtcgctcgatctggtcgtcgcc
ggcacgcatgacgcggtaatgatggtcgaatccgaagccaaggagctgtcggaagacatc
atgctcggcgcggtcatgttcggccaccgcgagatgcagaaggtgatcaacgcgatcatc
gatctcgccgaacaggcggccaaggatccgtgggacatggcggcccaggccgaccagagc
gcgatgaaggcgaagctgaaggcgctggtcggcgccgacatcgccgccgcctacaagctg
accaacaagtcggaacgcgcccaggcgctgaacgacgcccgcgccaaggccaaggcggcg
tttgcggacgaaaacccgcaggaccagatggccgcgatcaagctggtcaagaagctcgag
gccgatatcgtccgccaggcgatcctgaaggaaggccgccgcatcgacggccgcaacacc
cgccaggtccgcccgatcgaagcgattgccggcttcctgccgcgcacccatggctcggcg
ctgttcacccgcggcgagacgcagaccatctgcacgaccacccttggcaccaaggatgcc
gagcagatgatcgatggcctgaccggcctgcattaccagcatttcatgctgcactataac
ttcccgccctattcggtgggcgaggtcggccgcttcggcgcccccggccggcgcgagatc
ggccatggcaagcttgcctggcgcgcgctgcatccggtgctgccgaccaaggaagagttt
ccctacacggtccgcgtcaccagcgacatcaccgagtcgaacggctcgtcgtcgatggcg
acggtgtgcggcggttcgctgtcgctgatggatgccggcgtgccgatcaagcggccggtg
tcgggcatcgccatgggcctgatcctcgaaggcaaggaattcgcggtcatcagcgatatc
ctgggcgacgaagatcatctgggcgacatggacttcaaggtcgccggcacgtccgaaggc
atcaccagcctgcagatggacatcaagatcgccggcatcaccgaggagatcatgaaggtc
gcgctcgaacaggcgcatgaaggccgggcgcacatcctgggcgaaatggcgaaggcgctg
ggcgaaacccgcaccgagctgtcggcccatgcgccgcgcatcgagacgatcaccatcgac
aagtcgaagatccgcgacgtcatcggcaccggcggcaaggtgatccgcgagatcgtggcg
accaccggcgccaaggtcgacatcgacgatgaaggcgtgatcaagatctcctcggccgac
ctgtcgcagatcgaagccgccaaggcgtggatcctcggcatcgtcgaggaaccggaaatc
ggcaagatctacaccggcaaggtcgtgaacatcgtcgatttcggcgcgttcgtgaacttc
atgggcggtcgtgacggcctggtgcacgtctccgaaatcaaaaatgagcgcgtcgccaat
gtcggcgatgtcctgtccgaagggcaggaagtgaaggtcaaggtgctcgagatcgacaat
cgcggcaaggtccgcctgtcgatgcgcgtcgtcgaccaggaaaccggtgccgagcttgag
gacacccgcccggccaagccgccgcgcgaggaccgtggcgagcgcggcgaacgcggtgac
cggcccaagcgtgacggcgaccgccgccgcgacggtggccggggtggccgtgaccggggc
gaccgtccgcgccgcgagcgtggcgaaggcggcggccgtgaagacggcggcgagcccgaa
ttcgcgccggccttcctgaccggcggcgacgactga
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