KEGG   Sphingomonas changnyeongensis: GVO57_14250
Entry
GVO57_14250       CDS       T07798                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
schy  Sphingomonas changnyeongensis
Pathway
schy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:schy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GVO57_14250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:schy03019]
    GVO57_14250
Messenger RNA biogenesis [BR:schy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GVO57_14250
SSDB
Motif
Pfam: Lactamase_B Lactamase_B_2 RMMBL Lactamase_B_3 DRMBL DUF1769
Other DBs
NCBI-ProteinID: QHL92093
UniProt: A0A7Z2NYB9
LinkDB
Position
pC33:complement(64925..66175)
AA seq 416 aa
MTLSLTVHRGTEQIGGSCIELEAEGERLILDAGRPLDAPREARDLLPLTLDRVRPATVLF
SHPHMDHWGLVGELPDHWSLMTGHKSAELMRLTEELFGGVLDRSITCWNSRGGSFRVGPF
TVTPFLTDHSAFDAYMLLIECSGTRLLYTGDFRTHGRKAKLVEVTLKKLAGTVDVLLMEG
TNLGTAKPVITERELEHRFADVAGRTRGQVFVQWSAQNIDRTVTLYRAALRSGRELVIDL
YAADVLNRVAQDTNIPRPGRDFDKLRVLILPSGQRLFHRAGRSAEADRMARQPYAISRRR
LVGRPSIIMLRDSMFPDFERAGITFEPDDTYVFSNWKGYLDPNAPQSGWNRATANGARTL
HLHTSGHASARELERFAAQLNPRWLVPVHGIAWATPEITLPPVCRLADGETWNVPH
NT seq 1251 nt   +upstreamnt  +downstreamnt
ttgaccctatcgctgactgtccatcgggggacggagcaaatcggcggtagctgcatcgag
cttgaggccgagggtgagcgcctcattcttgatgcgggtcgtcctttggatgcgcctcgt
gaagctcgagatttgctaccgctgacgttggaccgagtacggccagcaaccgttctcttc
agccacccccacatggaccactgggggttggtgggtgagttgcccgatcattggtcccta
atgacggggcacaaatcggcggagctcatgcgactgacggaggagctgttcggcggggtg
cttgatcgttcgattacctgttggaacagtcgcggaggttcattcagggtcggccctttc
acggtcacaccgttcttgaccgaccacagcgcctttgacgcctacatgcttctgatcgaa
tgttccggcacacgactactctacacgggcgattttcggacgcacgggcgaaaggccaag
cttgtggaggtgaccttaaagaagctagcgggtaccgtcgacgtgctgctgatggaagga
accaatctcggcacggccaagccggtgatcaccgagcgcgagcttgaacatcgcttcgca
gatgttgccggcaggaccagagggcaggtgtttgttcagtggtcggcgcagaacattgac
cgcactgtcacgttgtatcgggcagcgctccgaagtggccgcgaactggtgatcgacctg
tatgccgctgatgtcctaaaccgtgtggcgcaggacacgaacatccctcggccaggccgc
gatttcgacaagctgcgagtccttattctcccgagcggacagcgccttttccatcgtgcc
ggccggtcagctgaggccgacaggatggccaggcagccctatgcaatctctcgccggcgg
ctggttggccgaccatccattatcatgctgcgagattcgatgttcccggacttcgagcgc
gctgggatcacgtttgaaccggatgacacctatgtgttctcgaactggaaaggctatctc
gacccgaatgcgccccaaagcggttggaaccgagcaaccgcgaatggtgcaaggactttg
catctccacacaagcgggcacgctagcgcccgagagttggagcgctttgccgcacagcta
aatccgcgctggctagtgccagtccatggcatcgcatgggcgacgcccgagatcacgctt
cctccagtctgtcggctagcggacggagagacttggaatgtgccgcactaa

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