Sphingomonas changnyeongensis: GVO57_14250
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Entry
GVO57_14250 CDS
T07798
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
schy
Sphingomonas changnyeongensis
Pathway
schy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GVO57_14250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schy03019
]
GVO57_14250
Messenger RNA biogenesis [BR:
schy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GVO57_14250
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
RMMBL
Lactamase_B_3
DRMBL
DUF1769
Motif
Other DBs
NCBI-ProteinID:
QHL92093
UniProt:
A0A7Z2NYB9
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Position
pC33:complement(64925..66175)
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AA seq
416 aa
AA seq
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MTLSLTVHRGTEQIGGSCIELEAEGERLILDAGRPLDAPREARDLLPLTLDRVRPATVLF
SHPHMDHWGLVGELPDHWSLMTGHKSAELMRLTEELFGGVLDRSITCWNSRGGSFRVGPF
TVTPFLTDHSAFDAYMLLIECSGTRLLYTGDFRTHGRKAKLVEVTLKKLAGTVDVLLMEG
TNLGTAKPVITERELEHRFADVAGRTRGQVFVQWSAQNIDRTVTLYRAALRSGRELVIDL
YAADVLNRVAQDTNIPRPGRDFDKLRVLILPSGQRLFHRAGRSAEADRMARQPYAISRRR
LVGRPSIIMLRDSMFPDFERAGITFEPDDTYVFSNWKGYLDPNAPQSGWNRATANGARTL
HLHTSGHASARELERFAAQLNPRWLVPVHGIAWATPEITLPPVCRLADGETWNVPH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttgaccctatcgctgactgtccatcgggggacggagcaaatcggcggtagctgcatcgag
cttgaggccgagggtgagcgcctcattcttgatgcgggtcgtcctttggatgcgcctcgt
gaagctcgagatttgctaccgctgacgttggaccgagtacggccagcaaccgttctcttc
agccacccccacatggaccactgggggttggtgggtgagttgcccgatcattggtcccta
atgacggggcacaaatcggcggagctcatgcgactgacggaggagctgttcggcggggtg
cttgatcgttcgattacctgttggaacagtcgcggaggttcattcagggtcggccctttc
acggtcacaccgttcttgaccgaccacagcgcctttgacgcctacatgcttctgatcgaa
tgttccggcacacgactactctacacgggcgattttcggacgcacgggcgaaaggccaag
cttgtggaggtgaccttaaagaagctagcgggtaccgtcgacgtgctgctgatggaagga
accaatctcggcacggccaagccggtgatcaccgagcgcgagcttgaacatcgcttcgca
gatgttgccggcaggaccagagggcaggtgtttgttcagtggtcggcgcagaacattgac
cgcactgtcacgttgtatcgggcagcgctccgaagtggccgcgaactggtgatcgacctg
tatgccgctgatgtcctaaaccgtgtggcgcaggacacgaacatccctcggccaggccgc
gatttcgacaagctgcgagtccttattctcccgagcggacagcgccttttccatcgtgcc
ggccggtcagctgaggccgacaggatggccaggcagccctatgcaatctctcgccggcgg
ctggttggccgaccatccattatcatgctgcgagattcgatgttcccggacttcgagcgc
gctgggatcacgtttgaaccggatgacacctatgtgttctcgaactggaaaggctatctc
gacccgaatgcgccccaaagcggttggaaccgagcaaccgcgaatggtgcaaggactttg
catctccacacaagcgggcacgctagcgcccgagagttggagcgctttgccgcacagcta
aatccgcgctggctagtgccagtccatggcatcgcatgggcgacgcccgagatcacgctt
cctccagtctgtcggctagcggacggagagacttggaatgtgccgcactaa
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