Sphingomonas changnyeongensis: GVO57_14305
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Entry
GVO57_14305 CDS
T07798
Name
(GenBank) TM0106 family RecB-like putative nuclease
Organism
schy
Sphingomonas changnyeongensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H_2
AAA_12
AAA_11
AAA_30
AAA_19
NAT10_TcmA_helicase
Viral_helicase1
DEAD
SLFN-g3_helicase
UvrD_C_2
NPHP3_N
IstB_IS21
AAA_22
GvpD_P-loop
Motif
Other DBs
NCBI-ProteinID:
QHL92053
UniProt:
A0A7Z2S705
LinkDB
All DBs
Position
pC33:complement(75267..78602)
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AA seq
1111 aa
AA seq
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MLKIDGGLRLSASDLMRFKGCRHATTLDLRLIEVGDIRPREDSAEAELLQLQGDAHELAY
LEQLRASGRRVVEIPKARISLQQSVELTLEAMRSGADVIFQGALLEGEWGGYSDFLERVE
RPSALGPWSYEVVDTKLKRKPDPKHVLQLCLYSDMVADLQGAAPDAAHLQLGDGTRFTVC
LAEVSAYARYARRALEAFVDERPATRPDPVTACGLCRWSDHCKAQWEAEDSLALVAGISR
SQRQKLEAAGINTMTALGAYNGRVPRMALETQRRLVAQARLQSARRAGGPPTFELRALEP
GKGFGLLPAPDAGDVFYDIEGDPYFPGGLEYLHGLWFREGDEWCFRAFWAHDRAEEGRAV
AELLDFLVDRMRRYPQAHIYHYANYEMAALRRLTAQHRTGEAAMDQLQRERRFVDLFKVV
SGALVASERGYSIKDLEAFYMEKRAASVATAGASVVFYEEWRQTGEQRLLDEIHEYNRTD
CVSTQLLRDWLVGTVRPTALPWPTLGAVPDAGSLSNVAAEDAELAALEARLQPVRARLGE
QVARLLLDLSQFYKREDKPTWWGIFDRLAQDSEELLDDLECIQGLEAVGDPVKVTTKSWE
RTYRFPPQETKLRAGQSPCVKPADAPEDVILRSIDHEAGTLVLRRSTAKGPLPDRLDLLP
EKPLRNDVLKDAVAAVTEEMIANSGTLPAVEHLLTRSPPVFRDGPRPDGVIGEEGDLPVQ
TSRAIGAMAGTTLAIQGPPGTGKTYVSALSIVDLVRSGARVAVSSNSHKAISNLLAAVAE
RARAEGVECRIVQKASDDGEGDAPGGIVLVSDNEAPEIAAAHVVGATAWHFARYPAPAFE
HLIVDEAGQVSLANILAMARCARNIVLVGDPMQLPQPLQGNHPGDSGRSCLEYLLDGHRI
VPADRGIFIPVSRRMHPRVCGFVSAAVYEGRLRSDDASARQTLVTRSGEDLVGAGMRSVL
HVGRSQVSPEEIDAVIARISEIEGSIYRDRDGREREIGHADVLVVAPYNAQVNALRARLP
AAVRVGTVDRFQGQEAPVCLVSMTTSSGEELPRDIAFLFSLNRINVAVSRAQVAATVFAS
PSLLETPCRTVEEMVLVNTLCMLHEYGGDRF
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagattgatggtgggctccggctatcggcgtcggacctgatgcggttcaagggt
tgcaggcacgcgacgacgctcgatctccgcctgatcgaggtgggagatatcaggccgagg
gaagacagcgccgaggcggagctgctgcagctgcagggcgatgcccatgagcttgcctat
cttgagcagctgcgtgcaagcggccggcgggtggtcgagatcccaaaggcgcggatctcg
ctacagcagtctgtcgagctcacgctcgaggcgatgcgcagcggcgcggacgtcatcttc
caaggcgcccttcttgagggcgagtggggcggatattccgactttctggagcgtgtagag
cgcccgtcggcgcttggtccctggtcctatgaggtggtcgacaccaagctgaagcgaaag
cccgatcccaagcacgtcctccagctttgtctgtacagcgatatggttgccgacctgcag
ggggccgcaccggatgcggcgcatctgcagctcggcgatggcacgcgctttaccgtttgc
ttggccgaggtgtcggcttatgcccgctatgcaaggcgggcgctggaagcgtttgtggac
gaacgacccgcgacgcgcccggatccggtcacggcttgtgggctatgcaggtggagcgat
cactgcaaggcgcaatgggaggcggaggatagccttgctctggttgcgggcatcagcagg
tcccagcgtcaaaagctggaggctgcgggcataaacacgatgacggcccttggggcctat
aacggtcgggtgccaaggatggcactcgagacacagcgacggcttgtggcccaggcccgg
ttgcaatcagcgcgccgtgctggtggtccgccgacatttgagcttcgtgcccttgagccg
ggcaagggttttggcctgctgcctgcaccggatgcgggtgatgtcttctacgacattgag
ggcgatccctatttcccgggtgggctagagtatctccacggcctctggtttcgcgagggt
gacgaatggtgctttcgggccttctgggcccatgatcgtgcggaggaaggtcgtgcagtc
gctgagctgctggatttcctcgtcgatcgaatgcgcagatatccgcaggcgcatatctat
cactacgccaactatgagatggcagcgctgaggcggctcacggcccagcatcgcacgggc
gaggcagcaatggatcagctgcaacgggagcgccggtttgttgacctcttcaaggtcgtc
tcgggtgcgcttgtggcctctgagcggggctattcgatcaaggatctcgaggccttctac
atggagaagcgggcggcgagtgttgcgaccgccggcgcgagtgtcgtgttctacgaggag
tggcgccagacgggcgaacagcggcttctcgatgagatccacgagtacaaccgcaccgac
tgtgtttcgacccagctgcttcgcgactggctggtgggcacggtcaggccgacggccttg
ccttggccgacgcttggtgccgttcccgatgcaggcagtctctcaaatgtagcggccgaa
gacgccgagctggcagcgcttgaagcgcgcttacagccggttcgagcgcgccttggcgag
caggtggctcggctgcttctcgatctcagccagttctacaagcgcgaggataaaccgacc
tggtggggcatttttgaccgccttgctcaggatagcgaggagttgctcgacgaccttgaa
tgcattcaagggctcgaggcggtgggtgatccggtcaaggtgaccaccaagtcctgggaa
cgtacctaccgatttccgccgcaggaaacgaagctgcgcgccggtcagtcgccatgcgtg
aagccggcggatgcgcctgaagacgttattctgcggtcgattgatcatgaagctggcacc
cttgtcctgcggcgctcgactgccaagggcccgctgccagaccggctcgaccttctgccc
gagaaaccgctgcgcaatgatgttctcaaggacgccgtggcagcagtcaccgaggagatg
attgccaactccggcacactccccgcggtcgagcatttgttgacgcggtcgccgcccgtt
tttcgcgacggcccccggccagatggggtgatcggggaagagggcgatctcccggttcaa
accagtcgcgctattggggcgatggctggaaccacgcttgccattcagggaccgcccggc
acgggcaaaacctatgtgagcgctttgtcgatcgtcgaccttgtccgttcgggggcccgc
gtcgcggtctcttcgaacagccacaaggcgatcagtaatctgctggcggctgttgccgag
cgcgcacgggctgagggcgtcgagtgccggatcgttcagaaagcctctgacgatggcgag
ggtgacgcacctggggggatcgtgctggtcagcgacaatgaggcgccggagatagcggcg
gcgcatgtcgttggtgcgacagcgtggcatttcgcccggtacccggctcccgcgttcgag
cacctgatcgtggacgaagccggtcaggtttcactcgccaacattcttgcgatggcccgt
tgtgctcgcaacatcgtgctggtgggagatccgatgcagctgcctcagccgctgcagggg
aaccatccgggggatagcgggcggtcttgtcttgagtatctccttgacggtcatcgtatt
gtgccggccgatcgcggcatcttcattccggtcagccgccggatgcatccaagggtctgc
ggcttcgtctcggctgctgtctatgagggacggctgcggagtgacgatgcatcggcacgg
cagacgctggttacgcgatcgggtgaggatctggtcggcgccgggatgcgcagcgttttg
catgttgggcgctctcaggtcagcccggaggagatcgatgcggtcatcgctcggatttcc
gagattgagggttcgatctatcgcgaccgggacgggcgggagcgtgagatcggacacgca
gatgttctggtggtggcgccctacaatgcgcaggtgaacgcgctcagggctcgtcttccg
gctgcggtccgcgtcgggactgtcgaccgatttcaggggcaggaggcacctgtgtgcttg
gtgtcgatgacgacatcgagcggtgaggagctgccccgcgacatcgcgttcctgttctcg
ctcaaccggatcaatgttgcagtgtcgagagcccaggtggcagcgacggtgtttgccagt
ccctccctgcttgagacgccgtgccgcaccgtggaggagatggtgctcgtcaacacgctg
tgcatgcttcacgaatatgggggtgacagattttga
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