Streptomyces collinus: B446_04195
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Entry
B446_04195 CDS
T02787
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sci
Streptomyces collinus
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sci03021
]
B446_04195
Transcription machinery [BR:
sci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B446_04195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
KORA
DUF7343
HTH_AsnC-type
HTH_24
DUF4423
MarR_2
NirdL-like_HTH
HTH_3
GerE
MarR
DUF6757
DUF134
HTH_28
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AGS67667
UniProt:
S5VAW5
LinkDB
All DBs
Position
complement(1033906..1034754)
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AA seq
282 aa
AA seq
DB search
MLTDTSTSRPGTPDTASAASARRTHDDAPDTMALFARMAELEEGPERDELRDELVTAWLP
MAHRIAGRFRDRGESVEDLRQVAALGLVKAVDRFDPSRGAFESYAVPTITGEVKRHFRDR
MWALRVPRRVQELRNRVRVARRELTQNPGTPEPTTAAIAEHTGLTEEEVAAGMEALESFS
TLSLDAELSSGEDGYSLADTLGAADGSYDVVVDREAAKEGLRRLPERERAILYMRYFEDM
TQSRIADQLGISQMHVSRLISRSCARVRDEVLGQRPGGRTTR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgacacgtcgacaagccgtcccggcacgcccgacaccgcttccgccgcctcc
gcgcggcgcacccatgacgacgcccccgacaccatggccctcttcgcccgcatggcggag
ctggaggagggtcccgaacgggacgagctgcgggacgaactggtgaccgcgtggctgccc
atggcccaccggatcgcgggccgcttccgtgaccgcggcgaatccgtcgaggacctgcgc
caggtcgccgcgctggggctggtgaaggccgtcgaccggttcgacccctcccgtggcgcg
ttcgagagttacgcggtgccgaccatcaccggcgaggtcaagcggcacttccgggaccgc
atgtgggccctgcgggtgccccgccgggtgcaggaactgcgcaaccgggtgagggtcgcc
cgccgggaactcacccagaacccgggcactcccgaacccaccaccgccgccatcgccgag
cacaccggcctcaccgaggaggaggtggccgcgggcatggaggcactggagagcttcagc
accctctcgctggacgccgagctgtcctccggcgaggacggctacagcctggccgacaca
ctcggcgccgcggacggctcctacgacgtcgtagtcgaccgcgaggcggccaaggagggc
ctgcgccggctgcccgagcgcgagcgggccatcctctacatgcgctacttcgaggacatg
acccagagccgcatcgcggaccagctgggcatctcccagatgcacgtctcccggctcatc
agccgcagctgcgcccgcgtgcgggacgaggtgctggggcagcgtccaggcggccgaacc
acccggtga
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