Streptomyces collinus: B446_10445
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Entry
B446_10445 CDS
T02787
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sci
Streptomyces collinus
Pathway
sci03030
DNA replication
sci03410
Base excision repair
sci03420
Nucleotide excision repair
sci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B446_10445
03410 Base excision repair
B446_10445
03420 Nucleotide excision repair
B446_10445
03440 Homologous recombination
B446_10445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sci03032
]
B446_10445
03400 DNA repair and recombination proteins [BR:
sci03400
]
B446_10445
Enzymes [BR:
sci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B446_10445
DNA replication proteins [BR:
sci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B446_10445
DNA repair and recombination proteins [BR:
sci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B446_10445
NER (nucleotide excision repair)
GGR (global genome repair) factors
B446_10445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGS68911
UniProt:
S5USW6
LinkDB
All DBs
Position
complement(2432100..2434826)
Genome browser
AA seq
908 aa
AA seq
DB search
MADTAPKKTDKTSGGARPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSERFTEYKANRSKTPDEFRGQVELIGELLDAMHAPRF
AVEGFEADDVIATLATQAEAEGFDVLIVTGDRDSFQLITEHTTVLYPTKGVSELTRFTPE
KVLEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFADLVERADEVKG
KAGQNLRDHLESVKLNRVLTELERQVELDRTVPDLERAPYDRKAVALVLDTLEIRNPSLR
ERLFAVDPGAEEAEVTPVAADGVELDGAILGTGELAPWLAEHGTGTLGVATVDTWALGAG
SVTEVALAAAGGAAAWFDPTELDEADENAFAAWLADAKRTKVFHNLKGAVRVFAEHGWDI
EGVRMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAAAADGQLAFGADDGAEAEALMI
QARAVLDLGEAFETRLGEVGAADLMRDMELPTSALLARMERHGIAADRTHLEAMEQTFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPRTKKTKTGYTTDADALAWLAGQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAGDGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTVASQV
FSVERDAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAGEARALMDTYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
HVDRALREADLKSRMLLQVHDEIVLEIAPGEREATEEIVRREMANAVSLRAPLDVSVGVG
RDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacacagcaccgaagaagaccgacaagacctccggcggcgcccgtccccggctg
atgctcatggacgggcactcgctggcctaccgcgcgttcttcgcgctgcccgcggagaac
ttcacgaccgcgacgggccagccgacgaacgccatctacggcttcgcctcgatgctggcc
aacaccctgcgtgacgaggcgcccacgcacttcgcggtcgccttcgacgtctcccgcaag
acctggcgctccgagcggttcaccgagtacaaggccaaccgctccaagacccccgacgag
ttcaggggccaggtcgagctgatcggcgagctcctcgacgcgatgcacgccccccggttc
gccgtcgagggcttcgaggcggacgacgtcatcgccaccctcgccacccaggccgaggcc
gagggcttcgacgtcctgatcgtcaccggcgaccgcgactccttccagctcatcaccgag
cacaccaccgtgctctacccgacgaagggcgtctcggagctgacccgcttcaccccggag
aaggttctcgagaagtacggattgacgcccgcccagtacccggacttcgccgccctgcgc
ggcgacccgtccgacaacctccccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggctcgttcgccgacctcgtcgagcgcgccgacgaggtcaagggc
aaggccgggcagaacctccgcgaccacctggagtccgtcaagctcaaccgcgtcctgacc
gagctggagcgccaggtcgagctggatcggacggtccccgacctggagcgcgccccgtac
gaccgcaaggccgtggccctggtcctggacaccctggagatccgcaacccgtcgctgcgc
gagcgtctcttcgccgtcgacccgggcgccgaggaggccgaggtcaccccggtcgccgcg
gacggtgtggaactcgacggcgcgatcctcggcaccggcgagctggccccctggctggcc
gagcacggcaccggcacgctcggtgtcgccacggtcgacacctgggcgctgggcgccggc
tcggtcaccgaggtcgcgctcgccgccgccgggggagcggccgcctggttcgaccccacc
gaactggacgaggccgacgagaacgcgttcgccgcctggctggccgacgcgaagcgcacc
aaggtgttccacaacctcaagggcgccgtccgcgtcttcgccgagcacggctgggacatc
gagggcgtgcgcatggacaccgcgctcgccgcctacctggtcaagcccggccgccgctcc
ttcgacctcgacgcgctgtccctggagtacctgcaccgcgaactggcgcccgccgcggcg
gccgacggccagctcgccttcggcgcggacgacggcgccgaggccgaggcgctgatgatc
caggcccgtgccgtcctcgacctcggcgaggccttcgagacccgcctcggtgaggtcggc
gccgcggacctcatgcgcgacatggaactgcccacctcggcgctgctcgcccgcatggag
cgccacggcatcgcggccgaccgcacccatctggaggccatggagcagacgttcgcgggc
gccgtgcagcaggccgtgaaggaggcccacgcggccgcggggcacgagttcaacctgggc
tcgcccaagcagctccaggaggtcctcttcggcgagctcgccctgccgcgcaccaagaag
accaagaccggctacaccaccgacgccgacgccctggcctggctcgccggacagaccgac
aacgaactgccggtgatcatgctccgccaccgtgagcaggcgaagctgcgggtcacggtc
gagggcctgatcaagacgatcgccggcgacggccgtatccacaccacgttcaaccagacg
gtggccgcgaccggccggctgtcgtccacggacccgaacctgcagaacatccccgtccgc
accgacgagggccgggccatccgccgcggcttcgtggtcggtgagggcttcgagtccctg
atgaccgccgactacagccagatcgaactgcgcgtgatggcccacctctccgaggacgag
ggcctgatcgaggcgttcacctccggcgaggacctgcacaccacggtcgcctcccaggtc
ttctccgtcgagcgggacgccgtcgacgcggagatgcgccgcaagatcaaggcgatgtcc
tacggcctggcgtacggcctgtccgccttcggcctctcccagcagctgaacatcgaggcg
ggcgaggcgcgcgccctgatggacacctacttcgagcgcttcggcggcgtgcgggactac
ctgcgccgggcggtcgacgaggcacgggcgaccggctacacggcgacgctgttcggccgc
cgccgctacctccccgacctcaacagcgacaaccggcagcgccgtgaggcggccgagcgg
atggccctcaacgcgccgatccagggcaccgcggccgacatcgtcaagatcgccatgctc
cacgtcgaccgggccctgcgcgaggcggacctcaagtcccgcatgctcctgcaggtgcac
gacgaaatcgtcctggagatcgcccccggcgagcgcgaggccacggaggagatcgtccgc
cgcgaaatggcgaacgcggtctccctcagggccccgctcgacgtctcggtgggcgtcggc
cgcgactgggaatcggccgcgcactaa
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