Streptomyces collinus: B446_10825
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Entry
B446_10825 CDS
T02787
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sci
Streptomyces collinus
Pathway
sci03030
DNA replication
sci03430
Mismatch repair
sci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B446_10825 (dnaE)
03430 Mismatch repair
B446_10825 (dnaE)
03440 Homologous recombination
B446_10825 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sci03032
]
B446_10825 (dnaE)
03400 DNA repair and recombination proteins [BR:
sci03400
]
B446_10825 (dnaE)
Enzymes [BR:
sci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B446_10825 (dnaE)
DNA replication proteins [BR:
sci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B446_10825 (dnaE)
DNA repair and recombination proteins [BR:
sci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B446_10825 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGS68987
UniProt:
S5VEL1
LinkDB
All DBs
Position
complement(2515503..2519042)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFEACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKILWGQPHQKRDDISGSGGYTHKTMWAVNRTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEAGAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAEMVDTTGMFEAKN
LMPKFDIPDGYTEVTWFKEEVRRGMERRFPGGIPEDRQKQADYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYGEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGLDIDLLSLPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNKLQEITPIHKELAEPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLFQAGARKKGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLSAVRNVGTNVVESIIKCRKAKGKYASFPDYLDKVDAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEDTGSEPGFGL
DVEFTTDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLADKADAGISQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLISTQLVEDAVVFVKGRL
DKREDVPRLVAMELMVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILSHHKGDSEVRI
KLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgaggcctgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccacagcgcgaagaaggcc
ggagtcaccccgatcatcgggatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatcctctggggccagccccaccagaagcgggacgacatctccggttccggcggt
tacacccacaagacgatgtgggcggtgaaccgtaccggactgcacaacctcttccggctc
tcctccgacgcctacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atctcccagtggtccgagggcatcgtcgcctccaccggctgtccctccggcgaggtgcag
acccggctccgcctcggccacttcgacgaggccctcaaggcggccgccgactaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcttgctggagatcggcaggaagctcggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgggcgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacgctcctggtggccgagatggtcgacaccaccggcatgttcgaggccaagaac
ctcatgccgaagttcgacatccccgacggctacaccgaggtgacctggttcaaggaggag
gtccgccgcggcatggagcgccgcttcccgggcggcatccccgaggaccggcagaagcag
gccgactacgagatggacgtcatcatccagatggggttcccgggttacttcctcgtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctggacccgatcccgcac
ggcctgatcttcgagcgcttcctcaaccccgagcgcgtctccatgcccgatgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccgctacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtcctgggctacccgtacgccatgggcgaccggctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccctcgcacccgcgc
tacggcgaggcgggcgagatccgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtggagggcctggtccgccagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagaccatcaccgagcacgtcccggtctgggtcaggcacaccgac
ggcgtgaccatcacccagtgggactatccgagctgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgcggtcaagatggtgaaggcc
aacaagggcctcgacatcgacctgctgtccctgccgctcgacgaccccaagaccttcgag
ctcctccagcgcggcgacaccctcggcgtcttccagttcgacggcggccccatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtctccgcgctctac
cgtccgggcccgatgggcatggactcgcacaccaactacgcgctgcgcaagaacaagctc
caggagatcaccccgatccacaaggagctggcggagcccctggaagaggtcctcgccgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggaa
ctggcgaagaacttcgtgctcttccaggcgggcgcgcgcaagaagggatacagcgacgag
gccatccaggccctgtgggacgtgctggtcccgttcgccggctacgcgttcaacaaggcg
cactccgccgcgtacggcctggtctcctactggaccgcctacctcaaggcgaactacccc
gccgagtacatggccgccctgctgacctccgtcaaggacgacaaggacaagtccgcggtc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgccgaacgtgaacgagtcc
gagtccaacttcgccgcccagggcgacgacgtgatcctcttcggcctctccgccgtgcgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaagtgccgcaaggccaaggggaagtac
gcctccttccccgactacctcgacaaggtcgacgccgtcgtctgcaacaagcgcaccacg
gaatcactgatcaaggccggcgccttcgacgagatgggccacacccgcaagggactcacc
gcccagtacgagccgatgatcgacaacgtcgtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgaggacaccggcagcgagcccggcttcggactc
gacgtggagttcaccacggacgagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctctacgtctccgaccacccgctcttcggcctggagcacgtcctcgccgac
aaggccgacgcgggcatctcccagctcaccggcggcgagcacgccgacggcgcggtcgtc
accatcggcggcatcatctccggtctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgcgaccgtcgaggacctcgccggctccatcgagtgcatgttcttcccggcgacc
taccagctcatctccacccaactcgtcgaggacgcggtggtgttcgtcaagggccgcctc
gacaagcgggaggacgtgccgcggctcgtcgccatggagctcatggtccccgacctctcc
aacgccggcaccaacgcgcccgtgatcctcaccatcccggccacccgggtcaccccgccc
atggtcagccgcctcggcgagatcctcagccaccacaagggcgacagcgaggtccgcatc
aagctccagggcccccgcaagaccaccgtgctccgcctcgaccggcaccgcgtcaagccc
gacccggcactgttcggcgacctgaaggtgctgctcggcccgtcctgcctggccggctga
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