Streptomyces collinus: B446_13485
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Entry
B446_13485 CDS
T02787
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
sci
Streptomyces collinus
Pathway
sci00523
Polyketide sugar unit biosynthesis
sci01100
Metabolic pathways
sci01110
Biosynthesis of secondary metabolites
sci01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
B446_13485
Enzymes [BR:
sci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
B446_13485
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Motif
Pfam:
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AGS69515
UniProt:
S5VMA9
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Position
3111183..3112484
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AA seq
433 aa
AA seq
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MSDTKARILSQVRDYHLEKESSQVFRPGVDEIWPSGAVLGPEDRAALVEAALDMKIAAGT
HSRRFESRFARYMKHRKAHLVNSGSSANLLALSALTSPHLEDRRLRPGDEVVTVAAGFPT
TVNPIIQNGLVPVFVDVELKTYNTTAERIKAAVGPKTRAIMIAHALGNPFEVADVARIAE
ENGLFLIEDNCDAVGSLHDGRLTGTFGDLTTVSFYPAHHLTMGEGGCVLTSNLALARIVE
SMRDWGRDCWCEPGENNRCFKRFEYQLGSLPAGYDHKYIYSHVGYNLKATDLQAALGLTQ
LAKVDAFTAARRHNWSRLREGLDGAPHLILPEATLNSEPSWFGFVITVAPDAPFTRKELV
DFLEARKIGTRNLFAGNLTRQPAYQDVPHRVVGDLTNSDIITEQTFWIGVYPGLTDEMTD
YMVASVREFLAGR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacgaaggcacggatactgagtcaggtgcgcgactaccacctggagaaggag
tcgtcgcaggtcttccgtcccggcgtcgacgagatctggccgtccggcgcggtgctcggc
cccgaggaccgggccgccctcgtggaggcggccctcgacatgaagatcgcggccggcacc
cactcccgccggttcgagtcgcgcttcgcccgctacatgaagcaccgcaaggcgcatctg
gtgaactccggctcgtcggcgaacctgctcgccctgtcggccctcacctcaccgcatctg
gaggaccgccggctccggcccggcgacgaggtcgtcacggtcgccgccggcttccccacg
accgtcaacccgatcatccagaacggcctcgtgcccgtcttcgtcgacgtcgagctgaag
acgtacaacaccacggccgagcgcatcaaggccgcggtcggcccgaagacccgcgccatc
atgatcgcgcacgcgctcggcaaccccttcgaggtcgccgacgtcgcgcgcatcgccgag
gagaacggcctcttcctcatcgaggacaactgcgacgccgtcggctccctgcacgacggc
cggctcaccggcaccttcggtgacctgacgaccgtcagcttctacccggcgcaccacctc
accatgggcgagggcggctgcgtgctcacctcgaacctcgcgctcgcccggatcgtcgag
tcgatgcgggactggggccgcgactgctggtgcgagcccggcgagaacaaccgctgcttc
aagcggttcgagtaccagctgggcagcctgccggccgggtacgaccacaagtacatctac
tcgcacgtgggctacaacctgaaggccaccgacctgcaggccgcactcgggctgacccag
ctggccaaggtcgacgcgttcaccgccgcccgccgtcacaactggagccggctgcgcgag
ggcctggacggcgccccgcacctgatcctgccggaggccacgctgaacagcgagcccagc
tggttcgggttcgtgatcacggtcgcccccgacgcgccgttcacccgcaaggagctggtg
gacttcctggaggcccgcaagatcggcacccgcaacctgttcgcgggcaacctcacccgg
cagcccgcctaccaggacgtgccgcaccgggtggtcggcgacctcaccaactcggacatc
atcaccgagcagaccttctggatcggcgtctatcccggcctcaccgacgagatgaccgac
tacatggtcgcgtccgtccgtgagttcctcgccggccggtga
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