Streptomyces collinus: B446_14510
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Entry
B446_14510 CDS
T02787
Name
(GenBank) deoxyribonuclease
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sci
Streptomyces collinus
Pathway
sci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B446_14510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sci03400
]
B446_14510
Enzymes [BR:
sci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B446_14510
DNA repair and recombination proteins [BR:
sci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B446_14510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
HHH_5
Helicase_RecD
PIF1
NPHP3_N
AAA_16
PhoH
UvrD-helicase
HTH_IclR
TraI_hel_assoc_N
nSTAND3
AAA
DEAD
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AGS69720
UniProt:
S5VMW0
LinkDB
All DBs
Position
complement(3349772..3351967)
Genome browser
AA seq
731 aa
AA seq
DB search
MLERITYANEENGYTVARVDTGRGGDLLTVVGALLGAQVGESLRMEGRWGSHPQYGRQFT
VENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHFGLDTLRVIEEEPKRLIEVPGL
GPKRTRKIADAWEEQKAIKEVMLFLQSVEVSTSVAVRIYKKYGDASISVVRNQPYRLAAD
VWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSADQGHCFLPEERLIADAVKLLQV
DTGLVIECLAELAGPGEEGEEPGVVREKVPGPDGDSESVTAVYLVPFHRAELSLSAQVLR
LLRTQEDRMLAFRDVDWDKALRWLKERTGADLAPEQQAAVRLALTQKVAVLTGGPGCGKS
FTVRSVVELARAKRAKVLLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYDRDRP
LDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRDLLADGGPV
PAVRLTRVFRQAQQSGVVTNAHRINAGLHPLTDGLKDFFLFVEDDTEEAGRLTVDVAARR
LPARFGLDPRRDVQVLAPMHRGPAGAGVLNGLLQQSVTPGRPDLPEKRFGGRVFRVGDKV
TQIRNNYDKGANGVFNGTVGVVTSLDPVDQRLTVLTDEDEEVPYEFDELDELAHAYAVTI
HRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRKAIGQAVRTVSAGRR
CTALDFRLAGA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgctggagcggatcacgtacgccaacgaggagaacggctacacggtcgcccgggtcgac
accggccgcggcggcgacctcctcacggtggtgggcgccctgctcggcgcccaggtgggc
gagtccctgcgcatggaggggcgctggggctcccacccccagtacggccgccagttcacg
gtggagaactacacgaccgtcctgccggccaccgtccagggcatccgccgctacctgggg
tccggcctggtcaagggcatcggcccggtcttcgccgaccgcatcacccagcacttcggc
ctggacaccctgcgggtcatcgaggaggagccgaagcggctgatcgaggtccccggcctc
ggccccaagcggacccggaagatcgccgacgcctgggaggagcagaaggcgatcaaggag
gtcatgctcttcctccagagcgtcgaggtctcgacgtccgtcgcggtgcgcatctacaag
aagtacggcgacgcctccatctccgtcgtccgcaaccagccgtaccgcctggcggccgac
gtctggggcatcggcttcctcaccgccgacaagatcgcccagtcggtcggcatcccgcac
gacagcccggagcgcgtgaaggcgggcctgcagtacgccctgtcccagtccgccgaccag
gggcactgcttcctgcccgaggagcggctcatcgccgacgccgtcaaactgctccaggtc
gacaccggcctggtcatcgagtgcctcgccgagctggccgggccgggcgaggagggcgag
gagccgggggtcgtccgcgagaaggtgccggggcccgacggcgactccgagtccgtcacc
gccgtctacctcgtgcccttccaccgcgccgaactgtccctctccgcccaggtgctgcgg
ctgctgcgcacccaggaggaccggatgcttgccttccgggacgtggactgggacaaggcg
cttcgctggctgaaggagcgcaccggcgccgacctcgcgcccgagcagcaggccgccgta
cggctcgcgctgacccagaaggtcgccgtcctcaccggcgggcccggctgcggcaagtcc
ttcacggtccgctcggtcgtggaactggcccgcgccaagcgcgccaaggtgctgctcgcc
gcccccaccggccgggccgccaagcgcctggccgaactgaccggcgccgaggcctccacc
gtccaccggctgctggagctgaagcccggcggtgacgcggcctacgaccgtgaccgtccg
ctggacgccgacctggtggtcgtggacgaggcgtccatgctcgacctgctgctcgccaac
aagctggtcaaggccgtgccgccgggggcgcacctgctgttcgtcggtgacgtggaccag
ttgccgagcgtcggcgccggcgaggtgctgcgggacctgctggccgacggcggcccggtc
ccggcggtgcggctcacccgggtcttccggcaggcccagcagtccggcgtcgtcaccaac
gcgcaccgcatcaacgccgggctgcacccgctcaccgacgggctcaaggacttcttcctc
ttcgtggaggacgacaccgaggaggccggccggctgaccgtggacgtggccgcccgccgg
ctcccggccaggttcgggctcgacccgcgccgggacgtgcaggtgctggcgcccatgcac
cgcggcccggccggcgccggcgtcctcaacggcctgctccagcagtccgtcacccccggc
cggcccgacctgcccgagaagcggttcggcggccgggtcttccgcgtcggcgacaaggtc
acccagatccgcaacaattacgacaagggggcgaacggcgtcttcaacggcaccgtgggc
gtggtcacctcgctcgatccggtcgaccagcggctgacggtgctgacggacgaggacgag
gaggtgccctacgagttcgacgaactggacgaactggcccacgcgtacgcggtcaccatc
caccgctcgcagggaagtgaatatcccgcggtggtgatcccggtcaccaccggcgcgtgg
atgatgctccagcggaacctgctgtacacggcggtgacacgggcgaaacggctggtcgtc
ctggtcggttcacgcaaggcgatcggccaggcggtgcgcaccgtctccgccggacgccgg
tgcacggcgctggacttcaggctggccggcgcctga
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