Streptomyces collinus: B446_15930
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Entry
B446_15930 CDS
T02787
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sci
Streptomyces collinus
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sci03021
]
B446_15930
Transcription machinery [BR:
sci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B446_15930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
MarR_2
HTH_24
Sigma70_ECF
HTH_28
GerE
DUF7343
MarR
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AGS70004
UniProt:
S5V4I6
LinkDB
All DBs
Position
3689298..3690200
Genome browser
AA seq
300 aa
AA seq
DB search
MSPRLDESHTPVATSTPPPDQLDPIDPFDALDPLEGLPEIPPFHEVGPVDARALSKTLFE
RLESLEEGTYEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVGTIGLIKAIDRFE
LARGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRAPTV
AELAARLGISNEQVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGYEDHGLEGIEYVE
SLKPLIAELPTRDRTILSLRFVAGMTQSEIGEELGISQMHVSRLLSRTLVRLRKGLTLEE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaatcgcataccccggtcgcgacgtcgacacccccaccggac
caactggatcccatcgatccgttcgacgccctcgacccgctcgagggcctcccggagatc
ccccccttccacgaggtcggcccggtcgacgcgcgggccctgtccaagaccctgttcgag
cgactggagtcgctggaggaagggacgtacgagtactcgtacgtccgcaacacgctcgtc
gagctgaacctcgcgctcgtcaagttcgccgcctcacgcttccgctcccgcagcgagccg
atggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgag
ctcgcgcgcggtgtggagttccccacgttcgccatgccgaccatcatcggcgagatcaag
cgcttcttccgtgacacctcgtggtccgtgcgcgtaccgcgccggctgcaggagctgcgg
ctcgacctggccaaggccggggacgagctggcccagcagctggaccgcgcccccaccgtc
gcggaactcgccgcacggctcggcatctccaacgagcaggtcgtcgagggcatggccgcc
tcgaacgcctacaccgcctcctcgctggacgcccagcccgaggaggacgactccgagggc
gcgctggcggaccgcatcggctacgaggaccacgggctcgagggcatcgagtacgtcgag
tccctgaagcccctgatcgccgagctcccgacccgcgaccgcacgatcctgtcgctgcgc
ttcgtggcgggcatgacccagtccgagatcggcgaggaactcggcatctcgcagatgcac
gtgtcccggctgctgtcgcggacgctggtgcggctgcgcaagggactgaccctggaggag
tga
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