Streptomyces collinus: B446_18290
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Entry
B446_18290 CDS
T02787
Name
(GenBank) ATP-dependent RNA helicase
Organism
sci
Streptomyces collinus
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Gene cluster
GFIT
Motif
Pfam:
DEAD
RDM3_C
Helicase_C
DUF4407
ResIII
DUF7491
DUF4140
FeoB_Cyto
Motif
Other DBs
NCBI-ProteinID:
AGS70474
UniProt:
S5V5N8
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Position
complement(4209478..4211661)
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AA seq
727 aa
AA seq
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MSVSSTDHIVVSENENELDDVTTEVTETTDTPQTTDTPEITFADLGLPEGVVRKLAQNGV
TVPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLATLAGGRTQKHKPRAVILTPT
RELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVDILVATPGRLRDIINRGA
CSLEDTQIAVLDEADQMSDLGFLPEVTELLDQVPAGGQRMLFSATMENEISTLVKRYLTD
PVTHEVDSAQGNVTTMSHHILIVKPKDKAPVTAAIASRKGRTIIFVRTQLGADRIAEQLR
DAGVKADALHGGMTQGARTRTLADFKDGYVNALVATDVAARGIHVDGIDLVLNVDPAGDH
KDYLHRAGRTARAGRTGTVVSLSLPHQRRQIFRLMEDAGVDAARHIIQGAGTFDPEVAEI
TGARSMTEVQAESANNAAQQAERELAQLTKELERAQRRAAELRDEADRLVARVARERGED
PETAVAEAQAAAAQAVTEPAVAEEPAQRETERDERPAASAPYERRERRSFDRDRGERGFE
RRDDRGGRSFERREERRPFDRDRNDRGFERRDDRGGDRGGRSFERREERRPFDRDRNDRG
FERRDDRGGDRGGRSFERRDDRGDRGGDRGGRSFERRDERRPFDRDRGGRPFERRDERGG
FRRDERGGHRGSDRPFNRDRRDDRPGFRSAGHDRPYGRRDDHRGSGSGSGSGSFGRRDDK
PRWKRNG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtccagtactgatcacatcgtcgtgtccgagaacgagaacgagctcgacgac
gtgaccaccgaggtcaccgagaccactgacaccccccagaccaccgacacccctgagatc
accttcgccgacctcgggcttcccgagggcgtcgtgcgcaagctggcccagaacggtgtc
accgtccccttcccgatccaggccgcgaccatcccggacgccctggccggcaaggacatc
ctcggccgtggccgcaccggctccggcaagaccctctccttcggtctgcccaccctggcc
acgctggccggcggccgcacccagaagcacaagccccgcgccgtcatcctgaccccgacg
cgcgagctggccatgcaggtggccgacgccctccagccgtacggcgacgtcctcggcctg
aagatgaaggtcgtctgcggcggtacgtcgatgggcaaccagatctacgccctggagcgc
ggcgtcgacatcctcgtcgccaccccgggccggctgcgcgacatcatcaaccgcggcgcc
tgctccctggaggacacccagatcgcggtcctcgacgaggccgaccagatgtccgacctg
ggcttcctgcccgaggtcaccgagctgctcgaccaggtcccggcgggcggccagcggatg
ctgttctccgcgaccatggagaacgagatctccacgctggtcaagcgctacctgaccgac
ccggtcacgcacgaggtcgacagcgcccagggcaacgtcacgaccatgtcgcaccacatc
ctcatcgtgaagcccaaggacaaggcgccggtcaccgccgcgatcgcctcccgcaagggc
cgcacgatcatcttcgtccgcacccagctgggcgccgaccgcatcgccgagcagctgcgt
gacgccggtgtgaaggccgacgcgctgcacggcggcatgacccagggcgcccgcacccgg
acgctggccgacttcaaggacggttacgtcaacgcgctcgtcgcgaccgacgtcgccgcc
cgcggcatccacgtggacggcatcgacctggtgctgaacgtcgacccggccggcgaccac
aaggactacctgcaccgcgcgggccgtaccgcgcgtgccggccgcaccggcacggtcgtc
tcgctgtccctgccgcaccagcggcgccagatcttccgcctgatggaggacgcgggcgtc
gacgccgcgcgccacatcatccagggcgccggcaccttcgacccggaggtcgccgagatc
accggcgcccggtcgatgaccgaggtccaggccgagtccgcgaacaacgcggcgcagcag
gccgagcgcgagctcgcccagctcaccaaggagctggagcgcgcccagcgccgcgccgcc
gagctgcgtgacgaggccgaccggctggtcgcccgggtcgcccgcgagcgcggcgaggac
ccggagaccgccgtggccgaggcccaggcggccgcggcccaggccgtgaccgagccggcc
gtggccgaggagccggcccagcgcgagaccgagcgcgacgagcgtccggcggcctcggcg
ccgtacgagcgccgggagcgccgttccttcgaccgcgaccgcggcgagcggggcttcgag
cgccgtgacgaccgtggcgggcgttccttcgagcgtcgtgaggagcgtcgtccgttcgac
cgcgaccgtaacgaccgtggtttcgagcgtcgcgacgaccgtggcggtgaccgcggtggc
cgttccttcgagcgtcgtgaggagcgtcgtccgttcgaccgcgaccgtaacgaccgtggt
ttcgagcgccgtgacgaccgtggcggtgaccgcggtggccgttccttcgagcgccgcgac
gaccggggcgaccgcggcggtgaccgtggcggccgttccttcgagcgccgtgacgagcgc
cgtccgttcgaccgcgaccgtggtggccgtcccttcgagcgccgtgacgagcggggcggc
ttccgccgcgacgagcgcggtggccaccggggcagcgaccgtccgttcaaccgcgaccgc
cgcgacgaccgtccgggcttccgctccgccggtcacgaccgcccctacggccgtcgtgac
gaccaccgcggttccggttccggttccggttccggctcgttcggccgccgcgacgacaag
ccgcgctggaagcgcaacggctga
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