Streptomyces collinus: B446_18540
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Entry
B446_18540 CDS
T02787
Name
(GenBank) SigF-like sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sci
Streptomyces collinus
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sci03021
]
B446_18540
Transcription machinery [BR:
sci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B446_18540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
NirdL-like_HTH
MarR
HTH_3
DUF134
DUF7343
HTH_5
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AGS70524
UniProt:
S5V5S9
LinkDB
All DBs
Position
4267021..4267890
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AA seq
289 aa
AA seq
DB search
MTVSASTAPPQEEAPAPASAPGAPGAPATPVAPEKRRGADTRALTQVLFAELKDLQPGTP
EHNRVRGALIEANLPLVRYAAARFRSRNEPMEDVIQVGTIGLINAIDRFDPERGVQFPTF
AMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRSPSTAEIAERLRIS
EEEVLSCIEAGRSYHATSLEAAQEGDGMPGLLDRIGYEDPALDGVEHRDLVRHLLVQLPE
REQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIEA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtgtcggccagtactgcgccgccccaggaggaggcgcccgcacccgcctccgcc
cccggcgctcccggcgcccccgccacccccgtcgcccccgagaagcgccgcggtgccgac
acccgcgcgctgacccaggtgctcttcgccgagctgaaggacctgcagccgggcacgccg
gagcacaaccgcgtgcggggggcgctcatcgaggccaaccttccgctcgtgcgctacgcg
gccgcccgcttccgctcccgcaacgagcccatggaggacgtgatccaggtcggcaccatc
ggcctgatcaacgccatcgaccggttcgaccccgagcggggcgtgcagttccccaccttc
gcgatgccgaccgtcgtcggggagatcaagcggtacttccgggacaacgtccgcacggtc
cacgtgccgcgccggctgcacgagctgtgggtccaggtgaacagcgccaccgaggacctc
accacggccttcggccgctcaccgtcgaccgccgagatcgccgagcggctgcggatcagc
gaggaggaggtgctctcctgcatcgaggcgggccgctcgtaccacgcgacctccctggag
gccgcgcaggagggcgacgggatgccgggactgctggaccgcatcggctacgaggacccg
gccctggacggcgtggagcaccgcgacctggtccgccacctcctggtccaactccccgaa
cgcgaacagagaattctccttctgcgctactacagcaatctcacccagtcccagatcagc
gcggaactgggtgtgtcccagatgcacgtctcgcggctactcgcgcgtagcttccagcgg
ctgcggtcggcgaatcggatcgaggcatga
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